Sequence Similarity Clusters for the Entities in PDB 1FGO

Entity #1 | Chains: A
SEED LIPOXYGENASE-1 protein, length: 839 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 13 4475
95 % 14 22 2257 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 14 22 2312
70 % 14 33 1444
50 % 14 33 1498
40 % 14 33 1480
30 % 14 33 1472

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures