Sequence Similarity Clusters for the Entities in PDB 1FGN

Entity #1 | Chains: L
IMMUNOGLOBULIN FAB 5G9 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28366
95 % 2 3 18883 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 14 26 2195
70 % 1313 2416 1
50 % 2682 4892 1
40 % 2682 4892 1
30 % 3073 5759 1
Entity #2 | Chains: H
IMMUNOGLOBULIN FAB 5G9 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28367
95 % 2 3 18825 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 14 19 1748
70 % 1301 2366 2
50 % 2683 4892 1
40 % 2683 4892 1
30 % 3074 5759 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures