Sequence Similarity Clusters for the Entities in PDB 1FGN

Entity #1 | Chains: L
IMMUNOGLOBULIN FAB 5G9 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27904
95 % 2 3 18591 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 14 26 2148
70 % 1281 2362 1
50 % 2616 4781 1
40 % 2616 4781 1
30 % 2997 5635 1
Entity #2 | Chains: H
IMMUNOGLOBULIN FAB 5G9 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27905
95 % 2 3 18535 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 14 19 1701
70 % 1268 2311 2
50 % 2617 4781 1
40 % 2617 4781 1
30 % 2998 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures