Sequence Similarity Clusters for the Entities in PDB 1FGN

Entity #1 | Chains: L
IMMUNOGLOBULIN FAB 5G9 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28769
95 % 2 3 19172 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 14 26 2233
70 % 1349 2474 1
50 % 2756 5011 1
40 % 2756 5011 1
30 % 3195 5941 1
Entity #2 | Chains: H
IMMUNOGLOBULIN FAB 5G9 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28770
95 % 2 3 19111 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 14 19 1787
70 % 1337 2424 2
50 % 2757 5011 1
40 % 2757 5011 1
30 % 3196 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures