Sequence Similarity Clusters for the Entities in PDB 1FGM

Entity #1 | Chains: A
SEED LIPOXYGENASE-1 protein, length: 839 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56088
95 % 19 22 2173 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 19 22 2229
70 % 20 33 1393
50 % 20 33 1438
40 % 20 33 1424
30 % 20 33 1418

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures