Sequence Similarity Clusters for the Entities in PDB 1FGL

Entity #1 | Chains: A
CYCLOPHILIN A protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 70 112 116
95 % 78 126 146 Flexibility: No
Max RMSD: 2.2, Avg RMSD: 0.5
PDBFlex
90 % 78 127 155
70 % 121 184 131
50 % 138 223 113
40 % 144 241 129
30 % 148 251 131
Entity #2 | Chains: B
HIV-1 GAG PROTEIN protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74851
95 % 1 1 52277
90 % 1 1 49594
70 % 1 1 43412
50 % 1 1 37054
40 % 1 1 32698
30 % 1 1 27767

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.