Sequence Similarity Clusters for the Entities in PDB 1FGL

Entity #1 | Chains: A
CYCLOPHILIN A protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 69 111 115
95 % 77 125 143 Flexibility: No
Max RMSD: 2.2, Avg RMSD: 0.5
PDBFlex
90 % 77 126 150
70 % 120 183 130
50 % 137 221 110
40 % 143 239 127
30 % 147 249 131
Entity #2 | Chains: B
HIV-1 GAG PROTEIN protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72683
95 % 1 1 50711
90 % 1 1 48154
70 % 1 1 42302
50 % 1 1 36194
40 % 1 1 31954
30 % 1 1 27124

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.