Sequence Similarity Clusters for the Entities in PDB 1FGB

Entity #1 | Chains: D,E,F,G,H
CHOLERA TOXIN B SUBUNIT PENTAMER protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 23 255
95 % 29 32 214 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.4
PDBFlex
90 % 46 55 82
70 % 49 58 93
50 % 49 58 127
40 % 49 58 147
30 % 49 58 163

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures