Sequence Similarity Clusters for the Entities in PDB 1FG9

Entity #1 | Chains: A,B
INTERFERON GAMMA protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 11846
95 % 2 3 11456 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.5
PDBFlex
90 % 2 3 11294
70 % 2 3 10670
50 % 6 7 4859
40 % 6 7 4567
30 % 6 7 4116
Entity #2 | Chains: C,D,E
INTERFERON-GAMMA RECEPTOR ALPHA CHAIN protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16662
95 % 2 2 15472 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.5
PDBFlex
90 % 2 2 15148
70 % 2 2 14187
50 % 2 2 12537
40 % 2 2 11257
30 % 4 4 7002

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures