Sequence Similarity Clusters for the Entities in PDB 1FG6

Entity #1 | Chains: C,D
PROTEASE RETROPEPSIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 14542
95 % 374 590 2 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 404 652 3
70 % 423 679 5
50 % 429 705 5
40 % 438 715 9
30 % 440 717 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3VFB 1 A, B protease UNP residues 501-599 11676 3.4.23.16 | Details
2 1FG6 1 C, D PROTEASE RETROPEPSIN 11676 3.4.23.16 | Details
3 1FG8 1 C, D PROTEASE RETROPEPSIN 11676 3.4.23.16 | Details