Sequence Similarity Clusters for the Entities in PDB 1FG2

Entity #1 | Chains: A,D,G,J
H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B ALPHA CHAIN protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 48 55 201
95 % 51 59 261
90 % 52 61 265
70 % 611 668 7
50 % 613 673 7
40 % 654 723 10
30 % 732 840 15
Entity #2 | Chains: B,E,H,K
BETA-2 MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 116 133 95
95 % 177 215 64
90 % 177 215 68
70 % 760 861 5
50 % 775 883 5
40 % 775 883 9
30 % 775 883 14
Entity #3 | Chains: C,F,I,L
LCMV PEPTIDIC EPITOPE GP33 protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.