Sequence Similarity Clusters for the Entities in PDB 1FFY

Entity #1 | Chains: T
ISOLEUCYL-TRNA rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
ISOLEUCYL-TRNA SYNTHETASE protein, length: 917 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 24286
95 % 1 3 20710 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 1 3 20134
70 % 1 3 18543
50 % 1 3 16142
40 % 1 3 14429
30 % 1 3 12378

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.