Sequence Similarity Clusters for the Entities in PDB 1FFX

Entity #1 | Chains: A,C
PROTEIN (TUBULIN) protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 11181
95 % 78 141 108
90 % 78 141 113
70 % 80 148 111
50 % 80 148 149
40 % 158 294 50
30 % 164 304 59
Entity #2 | Chains: B,D
PROTEIN (TUBULIN) protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 66 191
95 % 77 136 113 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.8
PDBFlex
90 % 77 141 110
70 % 79 146 110
50 % 79 146 148
40 % 159 294 50
30 % 165 304 59
Entity #3 | Chains: E
PROTEIN (STATHMIN-LIKE DOMAIN OF RB3) protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.