Sequence Similarity Clusters for the Entities in PDB 1FFX

Entity #1 | Chains: A,C
PROTEIN (TUBULIN) protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 11513
95 % 96 170 74 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 96 171 76
70 % 98 178 91
50 % 98 178 122
40 % 194 354 27
30 % 200 364 40
Entity #2 | Chains: B,D
PROTEIN (TUBULIN) protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 77 175
95 % 95 166 78 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.8
PDBFlex
90 % 95 171 75
70 % 97 176 90
50 % 97 176 121
40 % 195 354 27
30 % 201 364 40
Entity #3 | Chains: E
PROTEIN (STATHMIN-LIKE DOMAIN OF RB3) protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures