Sequence Similarity Clusters for the Entities in PDB 1FFX

Entity #1 | Chains: A,C
PROTEIN (TUBULIN) protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 11350
95 % 89 158 79 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 89 159 82
70 % 91 166 99
50 % 91 166 136
40 % 180 330 34
30 % 186 340 48
Entity #2 | Chains: B,D
PROTEIN (TUBULIN) protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 73 181
95 % 88 154 81 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.8
PDBFlex
90 % 88 159 81
70 % 90 164 98
50 % 90 164 135
40 % 181 330 34
30 % 187 340 48
Entity #3 | Chains: E
PROTEIN (STATHMIN-LIKE DOMAIN OF RB3) protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.