Sequence Similarity Clusters for the Entities in PDB 1FFX

Entity #1 | Chains: A,C
PROTEIN (TUBULIN) protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 56 377
95 % 108 187 69 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 108 188 72
70 % 110 196 88
50 % 110 196 117
40 % 218 390 26
30 % 224 400 40
Entity #2 | Chains: B,D
PROTEIN (TUBULIN) protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 105 160 89
95 % 107 183 72 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.8
PDBFlex
90 % 107 188 71
70 % 109 194 84
50 % 109 194 115
40 % 219 390 26
30 % 225 400 40
Entity #3 | Chains: E
PROTEIN (STATHMIN-LIKE DOMAIN OF RB3) protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures