Sequence Similarity Clusters for the Entities in PDB 1FFW

Entity #1 | Chains: A,C
CHEMOTAXIS PROTEIN CHEY protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 16 1643
95 % 66 74 316 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.8
PDBFlex
90 % 67 75 331
70 % 67 75 376
50 % 76 84 411
40 % 86 95 385
30 % 209 261 115
Entity #2 | Chains: B,D
CHEMOTAXIS PROTEIN CHEA protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 23669
95 % 3 5 6599 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 3 5 6584
70 % 3 5 6422
50 % 3 5 6002
40 % 3 5 5621
30 % 3 5 5040

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures