Sequence Similarity Clusters for the Entities in PDB 1FFW

Entity #1 | Chains: A,C
CHEMOTAXIS PROTEIN CHEY protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 16 1540
95 % 66 74 293 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.8
PDBFlex
90 % 67 75 303
70 % 67 75 347
50 % 76 84 370
40 % 85 93 345
30 % 197 245 117
Entity #2 | Chains: B,D
CHEMOTAXIS PROTEIN CHEA protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 22370
95 % 3 5 6251 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 3 5 6237
70 % 3 5 6091
50 % 3 5 5700
40 % 3 5 5332
30 % 3 5 4792

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.