Sequence Similarity Clusters for the Entities in PDB 1FFV

Entity #1 | Chains: A,D
CUTS, IRON-SULFUR PROTEIN OF CARBON MONOXIDE DEHYDROGENASE protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22349
95 % 1 2 19297 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 18795
70 % 1 2 17347
50 % 8 9 3674
40 % 11 13 2362
30 % 11 13 2262
Entity #2 | Chains: B,E
CUTL, MOLYBDOPROTEIN OF CARBON MONOXIDE DEHYDROGENASE protein, length: 803 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16386
95 % 1 2 15304 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 15020
70 % 1 2 14091
50 % 7 8 3741
40 % 7 8 3600
30 % 11 12 2431
Entity #3 | Chains: C,F
CUTM, FLAVOPROTEIN OF CARBON MONOXIDE DEHYDROGENASE protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37065
95 % 1 2 17386 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 17037
70 % 1 2 15829
50 % 7 8 3915
40 % 8 9 3492
30 % 9 10 2934

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.