Sequence Similarity Clusters for the Entities in PDB 1FFV

Entity #1 | Chains: A,D
CUTS, IRON-SULFUR PROTEIN OF CARBON MONOXIDE DEHYDROGENASE protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22367
95 % 1 2 20025 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 19464
70 % 1 2 17884
50 % 8 9 3863
40 % 11 14 2387
30 % 18 23 1287
Entity #2 | Chains: B,E
CUTL, MOLYBDOPROTEIN OF CARBON MONOXIDE DEHYDROGENASE protein, length: 803 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22365
95 % 1 2 20023 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 19462
70 % 1 2 17882
50 % 7 8 4144
40 % 7 8 3925
30 % 11 12 2502
Entity #3 | Chains: C,F
CUTM, FLAVOPROTEIN OF CARBON MONOXIDE DEHYDROGENASE protein, length: 287 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22366
95 % 1 2 20024 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 2 19463
70 % 1 2 17883
50 % 7 8 4145
40 % 8 9 3667
30 % 11 12 2546

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures