Sequence Similarity Clusters for the Entities in PDB 1FFT

Entity #1 | Chains: A,F
UBIQUINOL OXIDASE protein, length: 663 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30259
95 % 1 1 24911 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 24096
70 % 1 1 22015
50 % 1 1 19102
40 % 1 1 17021
30 % 1 1 14638
Entity #2 | Chains: B,G
UBIQUINOL OXIDASE protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35256
95 % 1 1 27762 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 26825
70 % 1 1 24318
50 % 1 1 20919
40 % 1 1 18482
30 % 1 1 15742
Entity #3 | Chains: C,H
UBIQUINOL OXIDASE protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40643
95 % 1 1 30884 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 29561
70 % 1 1 26501
50 % 1 1 22650
40 % 1 1 19942
30 % 1 1 16892
Entity #4 | Chains: D,I
UBIQUINOL OXIDASE protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.