Sequence Similarity Clusters for the Entities in PDB 1FFT

Entity #1 | Chains: A,F
UBIQUINOL OXIDASE protein, length: 663 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31634
95 % 1 1 26008 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 25124
70 % 1 1 22820
50 % 1 1 19758
40 % 1 1 17591
30 % 1 1 15117
Entity #2 | Chains: B,G
UBIQUINOL OXIDASE protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36821
95 % 1 1 28951 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 27940
70 % 1 1 25211
50 % 1 1 21642
40 % 1 1 19105
30 % 1 1 16260
Entity #3 | Chains: C,H
UBIQUINOL OXIDASE protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42392
95 % 1 1 32169 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 30747
70 % 1 1 27445
50 % 1 1 23405
40 % 1 1 20601
30 % 1 1 17439
Entity #4 | Chains: D,I
UBIQUINOL OXIDASE protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures