Sequence Similarity Clusters for the Entities in PDB 1FFT

Entity #1 | Chains: A,F
UBIQUINOL OXIDASE protein, length: 663 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30720
95 % 1 1 25311 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 24468
70 % 1 1 22263
50 % 1 1 19294
40 % 1 1 17185
30 % 1 1 14775
Entity #2 | Chains: B,G
UBIQUINOL OXIDASE protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35751
95 % 1 1 28170 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 27203
70 % 1 1 24579
50 % 1 1 21119
40 % 1 1 18655
30 % 1 1 15889
Entity #3 | Chains: C,H
UBIQUINOL OXIDASE protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41165
95 % 1 1 31297 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 29939
70 % 1 1 26771
50 % 1 1 22849
40 % 1 1 20115
30 % 1 1 17041
Entity #4 | Chains: D,I
UBIQUINOL OXIDASE protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.