Sequence Similarity Clusters for the Entities in PDB 1FFT

Entity #1 | Chains: A,F
UBIQUINOL OXIDASE protein, length: 663 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32062
95 % 1 1 26355 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 25454
70 % 1 1 23105
50 % 1 1 19980
40 % 1 1 17784
30 % 1 1 15286
Entity #2 | Chains: B,G
UBIQUINOL OXIDASE protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37321
95 % 1 1 29334 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 28305
70 % 1 1 25526
50 % 1 1 21893
40 % 1 1 19322
30 % 1 1 16450
Entity #3 | Chains: C,H
UBIQUINOL OXIDASE protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42960
95 % 1 1 32583 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 31130
70 % 1 1 27773
50 % 1 1 23664
40 % 1 1 20828
30 % 1 1 17639
Entity #4 | Chains: D,I
UBIQUINOL OXIDASE protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures