Sequence Similarity Clusters for the Entities in PDB 1FFT

Entity #1 | Chains: A,F
UBIQUINOL OXIDASE protein, length: 663 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31159
95 % 1 1 25663 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 24796
70 % 1 1 22532
50 % 1 1 19514
40 % 1 1 17383
30 % 1 1 14947
Entity #2 | Chains: B,G
UBIQUINOL OXIDASE protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36248
95 % 1 1 28555 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 27565
70 % 1 1 24883
50 % 1 1 21367
40 % 1 1 18872
30 % 1 1 16073
Entity #3 | Chains: C,H
UBIQUINOL OXIDASE protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41749
95 % 1 1 31735 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 30343
70 % 1 1 27096
50 % 1 1 23119
40 % 1 1 20351
30 % 1 1 17238
Entity #4 | Chains: D,I
UBIQUINOL OXIDASE protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures