Sequence Similarity Clusters for the Entities in PDB 1FFS

Entity #1 | Chains: A,C
CHEMOTAXIS PROTEIN CHEY protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 16 1639
95 % 61 74 315 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.8
PDBFlex
90 % 62 75 329
70 % 62 75 375
50 % 69 84 408
40 % 78 95 384
30 % 186 260 115
Entity #2 | Chains: B,D
CHEMOTAXIS PROTEIN CHEA protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 23631
95 % 2 5 6587 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 2 5 6571
70 % 2 5 6411
50 % 2 5 5993
40 % 2 5 5612
30 % 2 5 5032

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures