Sequence Similarity Clusters for the Entities in PDB 1FFS

Entity #1 | Chains: A,C
CHEMOTAXIS PROTEIN CHEY protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 16 1516
95 % 61 74 289 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.8
PDBFlex
90 % 62 75 298
70 % 62 75 336
50 % 69 84 353
40 % 77 93 334
30 % 177 243 115
Entity #2 | Chains: B,D
CHEMOTAXIS PROTEIN CHEA protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22210
95 % 2 5 6192 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 2 5 6175
70 % 2 5 6034
50 % 2 5 5650
40 % 2 5 5294
30 % 2 5 4756

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.