Sequence Similarity Clusters for the Entities in PDB 1FFS

Entity #1 | Chains: A,C
CHEMOTAXIS PROTEIN CHEY protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 26 1013
95 % 61 74 336 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.8
PDBFlex
90 % 62 75 348
70 % 62 75 390
50 % 69 84 433
40 % 78 95 425
30 % 190 262 124
Entity #2 | Chains: B,D
CHEMOTAXIS PROTEIN CHEA protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 7677
95 % 2 5 6945 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 2 5 6920
70 % 2 5 6720
50 % 2 5 6252
40 % 2 5 5809
30 % 2 5 5106

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures