Sequence Similarity Clusters for the Entities in PDB 1FFK

Entity #1 | Chains: 0
23S RRNA rna, length: 2922 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: H
RIBOSOMAL PROTEIN L14 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 44 751
95 % 36 68 531
90 % 36 68 559
70 % 36 68 612
50 % 36 144 216
40 % 36 144 244
30 % 44 431 32
Entity #11 | Chains: I
RIBOSOMAL PROTEIN L15E protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54768
95 % 1 1 38234
90 % 1 1 36427
70 % 36 68 606
50 % 36 139 229
40 % 36 139 258
30 % 36 139 268
Entity #12 | Chains: J
RIBOSOMAL PROTEIN L15 protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 312
95 % 36 74 465
90 % 36 74 492
70 % 36 74 537
50 % 36 74 626
40 % 36 74 669
30 % 43 420 40
Entity #13 | Chains: K
RIBOSOMAL PROTEIN L18 protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 310
95 % 36 74 463
90 % 36 74 490
70 % 36 74 534
50 % 36 76 605
40 % 36 76 647
30 % 36 78 629
Entity #14 | Chains: L
RIBOSOMAL PROTEIN L18E protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 358
95 % 36 68 533
90 % 36 68 562
70 % 36 68 614
50 % 36 70 677
40 % 36 70 718
30 % 36 70 725
Entity #15 | Chains: M
RIBOSOMAL PROTEIN L19 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 1955
95 % 36 68 530
90 % 36 68 558
70 % 36 68 611
50 % 36 68 705
40 % 36 70 716
30 % 36 71 708
Entity #16 | Chains: N
RIBOSOMAL PROTEIN L21E protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 359
95 % 36 68 534
90 % 36 68 564
70 % 36 68 616
50 % 36 70 679
40 % 36 70 720
30 % 36 71 711
Entity #17 | Chains: O
RIBOSOMAL PROTEIN L22 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 67 369
95 % 36 68 528
90 % 36 68 556
70 % 36 68 609
50 % 36 68 702
40 % 36 68 737
30 % 36 143 257
Entity #18 | Chains: P
RIBOSOMAL PROTEIN L23 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 317
95 % 36 74 471
90 % 36 74 499
70 % 36 74 544
50 % 36 76 607
40 % 36 78 623
30 % 43 359 54
Entity #19 | Chains: Q
RIBOSOMAL PROTEIN L24 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 315
95 % 36 74 469
90 % 36 74 497
70 % 36 74 542
50 % 36 148 213
40 % 36 148 239
30 % 36 148 251
Entity #2 | Chains: 9
5S RRNA rna, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: R
RIBOSOMAL PROTEIN L24E protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 70 345
95 % 34 70 511
90 % 34 70 537
70 % 34 70 588
50 % 34 70 680
40 % 34 70 721
30 % 34 70 726
Entity #21 | Chains: S
RIBOSOMAL PROTEIN L29 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 318
95 % 36 74 472
90 % 36 74 500
70 % 36 74 545
50 % 36 74 633
40 % 36 74 674
30 % 36 74 672
Entity #22 | Chains: T
RIBOSOMAL PROTEIN L30 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 356
95 % 36 68 529
90 % 36 68 557
70 % 36 68 610
50 % 36 68 703
40 % 36 70 715
30 % 36 71 707
Entity #23 | Chains: U
RIBOSOMAL PROTEIN L31E protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 361
95 % 36 68 536
90 % 36 68 566
70 % 36 68 618
50 % 36 68 707
40 % 36 68 741
30 % 36 68 745
Entity #24 | Chains: V
RIBOSOMAL PROTEIN L32E protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57932
95 % 3 5 12932
90 % 3 5 12692
70 % 3 5 11952
50 % 3 5 10709
40 % 3 5 9756
30 % 3 5 8490
Entity #25 | Chains: W
RIBOSOMAL PROTEIN L37AE protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63949
95 % 1 1 44378
90 % 1 1 42283
70 % 3 21 2599
50 % 7 30 1742
40 % 7 97 359
30 % 26 120 315
Entity #26 | Chains: X
RIBOSOMAL PROTEIN L37E protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 363
95 % 36 68 538
90 % 36 68 568
70 % 36 68 620
50 % 36 69 693
40 % 36 69 731
30 % 36 69 739
Entity #27 | Chains: Y
RIBOSOMAL PROTEIN L39E protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65294
95 % 36 68 540
90 % 36 68 569
70 % 36 68 621
50 % 36 141 224
40 % 36 141 255
30 % 36 141 265
Entity #28 | Chains: Z
RIBOSOMAL PROTEIN L44E protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 360
95 % 36 68 535
90 % 36 68 565
70 % 36 68 617
50 % 36 68 706
40 % 36 68 740
30 % 36 138 270
Entity #29 | Chains: 1
RIBOSOMAL PROTEIN L6 protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 355
95 % 36 68 527
90 % 36 68 555
70 % 36 68 608
50 % 36 68 701
40 % 36 143 246
30 % 44 426 37
Entity #3 | Chains: A
RIBOSOMAL PROTEIN L2 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 1931
95 % 36 68 525
90 % 36 68 553
70 % 36 68 605
50 % 36 139 228
40 % 36 141 254
30 % 36 141 263
Entity #4 | Chains: B
RIBOSOMAL PROTEIN L3 protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48444
95 % 36 74 455
90 % 36 74 483
70 % 36 74 529
50 % 36 74 618
40 % 36 148 237
30 % 36 148 249
Entity #5 | Chains: C
RIBOSOMAL PROTEIN L4 protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9021
95 % 36 74 458
90 % 36 74 486
70 % 36 74 532
50 % 36 74 621
40 % 36 76 646
30 % 36 77 636
Entity #6 | Chains: D
RIBOSOMAL PROTEIN L5 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 311
95 % 36 74 464
90 % 36 74 491
70 % 36 74 535
50 % 36 74 624
40 % 37 148 238
30 % 37 148 250
Entity #7 | Chains: E
RIBOSOMAL PROTEIN L7AE protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 1965
95 % 3 21 2548
90 % 36 68 561
70 % 36 68 613
50 % 51 96 348
40 % 58 110 310
30 % 58 112 323
Entity #8 | Chains: F
RIBOSOMAL PROTEIN L10E protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56905
95 % 1 1 39423
90 % 1 7 9186
70 % 3 27 1906
50 % 36 74 625
40 % 36 79 609
30 % 36 79 617
Entity #9 | Chains: G
RIBOSOMAL PROTEIN L13 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 313
95 % 36 74 466
90 % 36 74 494
70 % 36 74 539
50 % 36 74 629
40 % 37 77 633
30 % 37 78 632

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4V9F 29 1 50S ribosomal protein L37e 2238
2 1VQO 29 1 50S ribosomal protein L37e 2238
3 1VQ8 29 1 50S ribosomal protein L37e 2238
4 1S72 29 1 50S ribosomal protein L37e 2238
5 1JJ2 28 Z RIBOSOMAL PROTEIN L37E 2238
6 1YHQ 29 1 50S ribosomal protein L37e 2238
7 1VQP 29 1 50S ribosomal protein L37e 2238
8 1VQM 29 1 50S ribosomal protein L37e 2238
9 3CC2 27 1 50S ribosomal protein L37e 2238
10 1VQL 29 1 50S ribosomal protein L37e 2238
11 1VQK 29 1 50S ribosomal protein L37e 2238
12 1VQN 30 1 50S ribosomal protein L37e 2238
13 1YIJ 29 1 50S ribosomal protein L37e 2238
14 1YI2 29 1 50S ribosomal protein L37e 2238
15 1VQ9 29 1 50S ribosomal protein L37e 2238
16 1VQ7 29 1 50S ribosomal protein L37e 2238
17 3CCM 27 1 50S ribosomal protein L37e 2238
18 1VQ5 29 1 50S ribosomal protein L37e 2238
19 3CCJ 27 1 50S ribosomal protein L37e 2238
20 3CC7 27 1 50S ribosomal protein L37e 2238
21 1YIT 2 1 50S RIBOSOMAL PROTEIN L37E 2238
22 3CCE 27 1 50S ribosomal protein L37e 2238
23 3G6E 28 1 50S ribosomal protein L37e 2238
24 3CPW 28 Z 50S ribosomal protein L37e 2238
25 3CCU 27 1 50S ribosomal protein L37e 2238
26 1VQ6 30 1 50S ribosomal protein L37e 2238
27 1M90 29 2 RIBOSOMAL PROTEIN L37E 2238
28 3CCL 27 1 50S ribosomal protein L37e 2238
29 1YJW 2 1 50S RIBOSOMAL PROTEIN L37E 2238
30 1YJ9 29 1 50S ribosomal protein L37e 2238
31 3CD6 27 1 50S ribosomal protein L37e 2238
32 3CCV 27 1 50S ribosomal protein L37e 2238
33 3CC4 27 1 50S ribosomal protein L37e 2238
34 2OTL 28 1 50S ribosomal protein L37e 2238
35 3G71 28 1 50S ribosomal protein L37e 2238
36 1FFK 26 X RIBOSOMAL PROTEIN L37E 2238
37 1VQ4 29 1 50S ribosomal protein L37e 2238
38 1YJN 29 1 50S ribosomal protein L37e 2238
39 3CMA 27 1 50S ribosomal protein L37e 2238
40 3CCS 27 1 50S ribosomal protein L37e 2238
41 3CCQ 27 1 50S ribosomal protein L37e 2238
42 3I56 27 1 50S ribosomal protein L37e 2238
43 3CCR 27 1 50S ribosomal protein L37e 2238
44 2OTJ 28 1 50S ribosomal protein L37e 2238
45 1KQS 30 Z RIBOSOMAL PROTEIN L37E 2238
46 3OW2 28 Z 50S ribosomal protein L37e 2238
47 3CXC 29 Z RIBOSOMAL PROTEIN L37E 2238
48 1QVG 29 Z 50S ribosomal protein L37e 2238
49 3CME 27 1 50S ribosomal protein L37e 2238
50 2QEX 28 1 50S ribosomal protein L37e 2238
51 1KC8 28 2 RIBOSOMAL PROTEIN L37E 2238
52 1N8R 28 2 50S ribosomal protein L37e 2238
53 1Q81 29 2 50S ribosomal protein L37e 2238
54 1Q82 29 2 50S ribosomal protein L37e 2238
55 1QVF 29 Z 50S ribosomal protein L37e 2238
56 1NJI 28 2 50S ribosomal protein L37e 2238
57 1K73 28 2 RIBOSOMAL PROTEIN L37E 2238
58 1K9M 28 2 RIBOSOMAL PROTEIN L37E 2238
59 1KD1 28 2 RIBOSOMAL PROTEIN L37E 2238
60 3I55 28 1 50S ribosomal protein L37e 2238
61 1K8A 28 2 RIBOSOMAL PROTEIN L37E 2238
62 1Q86 29 2 50S ribosomal protein L37e 2238
63 1M1K 28 2 RIBOSOMAL PROTEIN L37E 2238
64 3G4S 28 1 50S ribosomal protein L37e 2238
65 1W2B 31 Z RIBOSOMAL PROTEIN L37E 2238
66 2QA4 29 1 50S ribosomal protein L37e 2238
67 1Q7Y 29 2 50S ribosomal protein L37e 2238
68 4ADX 2 1 RPL37E 145262
69 4V7H 49 BY 60S ribosomal protein L37(A) 5541