Sequence Similarity Clusters for the Entities in PDB 1FFK

Entity #1 | Chains: 0
23S RRNA rna, length: 2922 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: H
RIBOSOMAL PROTEIN L14 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 44 829
95 % 35 68 665
90 % 35 68 692
70 % 35 68 744
50 % 35 176 200
40 % 35 176 221
30 % 43 513 31
Entity #11 | Chains: I
RIBOSOMAL PROTEIN L15E protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59262
95 % 1 1 41301
90 % 1 1 39301
70 % 35 68 736
50 % 35 172 209
40 % 35 172 233
30 % 35 172 238
Entity #12 | Chains: J
RIBOSOMAL PROTEIN L15 protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 418
95 % 35 74 588
90 % 35 74 619
70 % 35 74 651
50 % 35 74 696
40 % 35 74 735
30 % 42 495 37
Entity #13 | Chains: K
RIBOSOMAL PROTEIN L18 protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 416
95 % 35 74 586
90 % 35 74 617
70 % 35 74 648
50 % 35 76 666
40 % 35 76 709
30 % 35 79 678
Entity #14 | Chains: L
RIBOSOMAL PROTEIN L18E protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 475
95 % 35 68 666
90 % 35 68 694
70 % 35 68 746
50 % 35 70 763
40 % 35 70 799
30 % 35 70 788
Entity #15 | Chains: M
RIBOSOMAL PROTEIN L19 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2182
95 % 35 68 664
90 % 35 68 690
70 % 35 68 742
50 % 35 68 793
40 % 35 72 764
30 % 35 72 755
Entity #16 | Chains: N
RIBOSOMAL PROTEIN L21E protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 476
95 % 35 68 668
90 % 35 68 696
70 % 35 68 749
50 % 35 70 765
40 % 35 70 801
30 % 35 71 772
Entity #17 | Chains: O
RIBOSOMAL PROTEIN L22 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 67 489
95 % 35 68 662
90 % 35 68 688
70 % 35 68 739
50 % 35 68 790
40 % 35 68 825
30 % 35 175 232
Entity #18 | Chains: P
RIBOSOMAL PROTEIN L23 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 423
95 % 35 74 592
90 % 35 74 623
70 % 35 74 657
50 % 35 76 670
40 % 35 78 692
30 % 42 402 60
Entity #19 | Chains: Q
RIBOSOMAL PROTEIN L24 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 422
95 % 35 74 591
90 % 35 74 622
70 % 35 74 656
50 % 35 180 199
40 % 35 180 217
30 % 35 180 226
Entity #2 | Chains: 9
5S RRNA rna, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: R
RIBOSOMAL PROTEIN L24E protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 33 70 454
95 % 33 70 638
90 % 33 70 663
70 % 33 70 717
50 % 33 70 766
40 % 33 70 804
30 % 33 70 792
Entity #21 | Chains: S
RIBOSOMAL PROTEIN L29 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 424
95 % 35 74 593
90 % 35 74 624
70 % 35 74 658
50 % 35 74 701
40 % 35 74 738
30 % 35 74 730
Entity #22 | Chains: T
RIBOSOMAL PROTEIN L30 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 473
95 % 35 68 663
90 % 35 68 689
70 % 35 68 740
50 % 35 68 791
40 % 35 70 796
30 % 35 71 769
Entity #23 | Chains: U
RIBOSOMAL PROTEIN L31E protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 478
95 % 35 68 670
90 % 35 68 698
70 % 35 68 751
50 % 35 68 796
40 % 35 68 829
30 % 35 68 814
Entity #24 | Chains: V
RIBOSOMAL PROTEIN L32E protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62617
95 % 3 5 14045
90 % 3 5 13782
70 % 3 5 12926
50 % 3 5 11528
40 % 3 5 10459
30 % 3 5 9060
Entity #25 | Chains: W
RIBOSOMAL PROTEIN L37AE protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68921
95 % 1 1 47746
90 % 1 1 45380
70 % 3 21 2865
50 % 7 30 1917
40 % 7 129 302
30 % 26 152 267
Entity #26 | Chains: X
RIBOSOMAL PROTEIN L37E protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 480
95 % 35 68 673
90 % 35 68 701
70 % 35 68 755
50 % 35 69 778
40 % 35 69 815
30 % 35 69 804
Entity #27 | Chains: Y
RIBOSOMAL PROTEIN L39E protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70331
95 % 35 68 674
90 % 35 68 702
70 % 35 68 756
50 % 35 173 205
40 % 35 173 228
30 % 35 173 235
Entity #28 | Chains: Z
RIBOSOMAL PROTEIN L44E protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 477
95 % 35 68 669
90 % 35 68 697
70 % 35 68 750
50 % 35 68 795
40 % 35 68 828
30 % 35 169 242
Entity #29 | Chains: 1
RIBOSOMAL PROTEIN L6 protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 472
95 % 35 68 661
90 % 35 68 687
70 % 35 68 738
50 % 35 68 789
40 % 35 174 226
30 % 43 504 34
Entity #3 | Chains: A
RIBOSOMAL PROTEIN L2 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2166
95 % 35 68 658
90 % 35 68 684
70 % 35 68 734
50 % 35 171 208
40 % 35 173 227
30 % 35 173 234
Entity #4 | Chains: B
RIBOSOMAL PROTEIN L3 protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52492
95 % 35 74 577
90 % 35 74 609
70 % 35 74 643
50 % 35 74 689
40 % 35 180 215
30 % 35 180 224
Entity #5 | Chains: C
RIBOSOMAL PROTEIN L4 protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9908
95 % 35 74 582
90 % 35 74 615
70 % 35 74 646
50 % 35 74 691
40 % 35 76 707
30 % 36 78 686
Entity #6 | Chains: D
RIBOSOMAL PROTEIN L5 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 417
95 % 35 74 587
90 % 35 74 618
70 % 35 74 649
50 % 35 74 694
40 % 36 180 216
30 % 36 180 225
Entity #7 | Chains: E
RIBOSOMAL PROTEIN L7AE protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2194
95 % 3 21 2836
90 % 35 68 693
70 % 35 68 745
50 % 50 105 322
40 % 57 122 280
30 % 57 124 282
Entity #8 | Chains: F
RIBOSOMAL PROTEIN L10E protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61521
95 % 1 1 42557
90 % 1 7 10001
70 % 3 27 2134
50 % 35 74 695
40 % 35 79 679
30 % 35 79 680
Entity #9 | Chains: G
RIBOSOMAL PROTEIN L13 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 419
95 % 35 74 589
90 % 35 74 620
70 % 35 74 654
50 % 35 74 700
40 % 36 77 702
30 % 36 78 689

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3G6E 26 Y 50S ribosomal protein L32e 2238
2 3G71 26 Y 50S ribosomal protein L32e 2238
3 1FFK 24 V RIBOSOMAL PROTEIN L32E 2238
4 3OW2 26 X 50S ribosomal protein L32e 2238
5 3G4S 26 Y 50S ribosomal protein L32e 2238