Sequence Similarity Clusters for the Entities in PDB 1FFK

Entity #1 | Chains: 0
23S RRNA rna, length: 2922 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: H
RIBOSOMAL PROTEIN L14 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 44 757
95 % 36 68 540
90 % 36 68 568
70 % 36 68 617
50 % 36 145 222
40 % 36 145 248
30 % 44 444 35
Entity #11 | Chains: I
RIBOSOMAL PROTEIN L15E protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55536
95 % 1 1 38764
90 % 1 1 36937
70 % 36 68 611
50 % 36 140 233
40 % 36 140 260
30 % 36 140 272
Entity #12 | Chains: J
RIBOSOMAL PROTEIN L15 protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 320
95 % 36 74 475
90 % 36 74 504
70 % 36 74 547
50 % 36 74 631
40 % 36 74 677
30 % 43 433 38
Entity #13 | Chains: K
RIBOSOMAL PROTEIN L18 protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 318
95 % 36 74 473
90 % 36 74 502
70 % 36 74 544
50 % 36 76 610
40 % 36 76 653
30 % 36 78 639
Entity #14 | Chains: L
RIBOSOMAL PROTEIN L18E protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 364
95 % 36 68 541
90 % 36 68 570
70 % 36 68 619
50 % 36 70 681
40 % 36 70 726
30 % 36 70 732
Entity #15 | Chains: M
RIBOSOMAL PROTEIN L19 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 1991
95 % 36 68 539
90 % 36 68 567
70 % 36 68 616
50 % 36 68 707
40 % 36 70 723
30 % 36 71 713
Entity #16 | Chains: N
RIBOSOMAL PROTEIN L21E protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 366
95 % 36 68 543
90 % 36 68 573
70 % 36 68 622
50 % 36 70 683
40 % 36 70 728
30 % 36 71 716
Entity #17 | Chains: O
RIBOSOMAL PROTEIN L22 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 67 374
95 % 36 68 537
90 % 36 68 565
70 % 36 68 614
50 % 36 68 705
40 % 36 68 745
30 % 36 144 259
Entity #18 | Chains: P
RIBOSOMAL PROTEIN L23 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 326
95 % 36 74 480
90 % 36 74 510
70 % 36 74 554
50 % 36 76 613
40 % 36 78 631
30 % 43 371 55
Entity #19 | Chains: Q
RIBOSOMAL PROTEIN L24 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 324
95 % 36 74 478
90 % 36 74 508
70 % 36 74 552
50 % 36 149 219
40 % 36 149 242
30 % 36 149 253
Entity #2 | Chains: 9
5S RRNA rna, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: R
RIBOSOMAL PROTEIN L24E protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 70 348
95 % 34 70 518
90 % 34 70 545
70 % 34 70 592
50 % 34 70 684
40 % 34 70 729
30 % 34 70 733
Entity #21 | Chains: S
RIBOSOMAL PROTEIN L29 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 327
95 % 36 74 481
90 % 36 74 511
70 % 36 74 555
50 % 36 74 637
40 % 36 74 682
30 % 36 74 682
Entity #22 | Chains: T
RIBOSOMAL PROTEIN L30 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 362
95 % 36 68 538
90 % 36 68 566
70 % 36 68 615
50 % 36 68 706
40 % 36 70 721
30 % 36 71 712
Entity #23 | Chains: U
RIBOSOMAL PROTEIN L31E protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 368
95 % 36 68 545
90 % 36 68 575
70 % 36 68 624
50 % 36 68 710
40 % 36 68 749
30 % 36 68 754
Entity #24 | Chains: V
RIBOSOMAL PROTEIN L32E protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58749
95 % 3 5 13117
90 % 3 5 12880
70 % 3 5 12117
50 % 3 5 10840
40 % 3 5 9867
30 % 3 5 8579
Entity #25 | Chains: W
RIBOSOMAL PROTEIN L37AE protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64836
95 % 1 1 44989
90 % 1 1 42850
70 % 3 21 2636
50 % 7 30 1772
40 % 7 98 369
30 % 26 121 320
Entity #26 | Chains: X
RIBOSOMAL PROTEIN L37E protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 369
95 % 36 68 546
90 % 36 68 576
70 % 36 68 625
50 % 36 69 696
40 % 36 69 739
30 % 36 69 746
Entity #27 | Chains: Y
RIBOSOMAL PROTEIN L39E protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66192
95 % 36 68 547
90 % 36 68 577
70 % 36 68 626
50 % 36 142 228
40 % 36 142 257
30 % 36 142 266
Entity #28 | Chains: Z
RIBOSOMAL PROTEIN L44E protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 367
95 % 36 68 544
90 % 36 68 574
70 % 36 68 623
50 % 36 68 709
40 % 36 68 748
30 % 36 139 275
Entity #29 | Chains: 1
RIBOSOMAL PROTEIN L6 protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 361
95 % 36 68 536
90 % 36 68 564
70 % 36 68 613
50 % 36 68 704
40 % 36 144 250
30 % 44 439 37
Entity #3 | Chains: A
RIBOSOMAL PROTEIN L2 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 1968
95 % 36 68 534
90 % 36 68 562
70 % 36 68 610
50 % 36 140 232
40 % 36 142 256
30 % 36 142 264
Entity #4 | Chains: B
RIBOSOMAL PROTEIN L3 protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49105
95 % 36 74 466
90 % 36 74 496
70 % 36 74 540
50 % 36 74 624
40 % 36 149 237
30 % 36 149 248
Entity #5 | Chains: C
RIBOSOMAL PROTEIN L4 protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9175
95 % 36 74 469
90 % 36 74 499
70 % 36 74 543
50 % 36 74 627
40 % 36 76 652
30 % 36 77 647
Entity #6 | Chains: D
RIBOSOMAL PROTEIN L5 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 319
95 % 36 74 474
90 % 36 74 503
70 % 36 74 545
50 % 36 74 629
40 % 37 150 236
30 % 37 150 247
Entity #7 | Chains: E
RIBOSOMAL PROTEIN L7AE protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2000
95 % 3 21 2587
90 % 36 68 569
70 % 36 68 618
50 % 51 98 344
40 % 58 112 314
30 % 58 114 325
Entity #8 | Chains: F
RIBOSOMAL PROTEIN L10E protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57705
95 % 1 1 39976
90 % 1 7 9334
70 % 3 27 1944
50 % 36 74 630
40 % 36 79 619
30 % 36 79 629
Entity #9 | Chains: G
RIBOSOMAL PROTEIN L13 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 321
95 % 36 74 476
90 % 36 74 506
70 % 36 74 550
50 % 36 74 634
40 % 37 77 643
30 % 37 78 642

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1FFK 24 V RIBOSOMAL PROTEIN L32E 2238