Sequence Similarity Clusters for the Entities in PDB 1FFK

Entity #1 | Chains: 0
23S RRNA rna, length: 2922 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: H
RIBOSOMAL PROTEIN L14 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 44 827
95 % 36 68 653
90 % 36 68 682
70 % 36 68 727
50 % 36 175 201
40 % 36 175 222
30 % 44 509 31
Entity #11 | Chains: I
RIBOSOMAL PROTEIN L15E protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58549
95 % 1 1 40812
90 % 1 1 38857
70 % 36 68 719
50 % 36 171 206
40 % 36 171 230
30 % 36 171 236
Entity #12 | Chains: J
RIBOSOMAL PROTEIN L15 protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 416
95 % 36 74 577
90 % 36 74 608
70 % 36 74 639
50 % 36 74 688
40 % 36 74 727
30 % 43 491 37
Entity #13 | Chains: K
RIBOSOMAL PROTEIN L18 protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 414
95 % 36 74 575
90 % 36 74 606
70 % 36 74 636
50 % 36 76 661
40 % 36 76 702
30 % 36 79 674
Entity #14 | Chains: L
RIBOSOMAL PROTEIN L18E protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 465
95 % 36 68 654
90 % 36 68 684
70 % 36 68 729
50 % 36 70 751
40 % 36 70 788
30 % 36 70 781
Entity #15 | Chains: M
RIBOSOMAL PROTEIN L19 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2158
95 % 36 68 652
90 % 36 68 680
70 % 36 68 725
50 % 36 68 779
40 % 36 72 754
30 % 36 72 749
Entity #16 | Chains: N
RIBOSOMAL PROTEIN L21E protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 467
95 % 36 68 657
90 % 36 68 686
70 % 36 68 732
50 % 36 70 754
40 % 36 70 791
30 % 36 71 762
Entity #17 | Chains: O
RIBOSOMAL PROTEIN L22 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 67 482
95 % 36 68 650
90 % 36 68 678
70 % 36 68 722
50 % 36 68 776
40 % 36 68 813
30 % 36 174 230
Entity #18 | Chains: P
RIBOSOMAL PROTEIN L23 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 422
95 % 36 74 582
90 % 36 74 612
70 % 36 74 645
50 % 36 76 665
40 % 36 78 681
30 % 43 399 58
Entity #19 | Chains: Q
RIBOSOMAL PROTEIN L24 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 420
95 % 36 74 580
90 % 36 74 611
70 % 36 74 644
50 % 36 179 195
40 % 36 179 213
30 % 36 179 225
Entity #2 | Chains: 9
5S RRNA rna, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: R
RIBOSOMAL PROTEIN L24E protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 70 447
95 % 34 70 628
90 % 34 70 656
70 % 34 70 703
50 % 34 70 756
40 % 34 70 795
30 % 34 70 787
Entity #21 | Chains: S
RIBOSOMAL PROTEIN L29 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 423
95 % 36 74 583
90 % 36 74 613
70 % 36 74 646
50 % 36 74 693
40 % 36 74 730
30 % 36 74 726
Entity #22 | Chains: T
RIBOSOMAL PROTEIN L30 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 463
95 % 36 68 651
90 % 36 68 679
70 % 36 68 723
50 % 36 68 777
40 % 36 70 785
30 % 36 71 759
Entity #23 | Chains: U
RIBOSOMAL PROTEIN L31E protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 469
95 % 36 68 659
90 % 36 68 688
70 % 36 68 734
50 % 36 68 782
40 % 36 68 817
30 % 36 68 808
Entity #24 | Chains: V
RIBOSOMAL PROTEIN L32E protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61882
95 % 3 5 13836
90 % 3 5 13582
70 % 3 5 12745
50 % 3 5 11385
40 % 3 5 10328
30 % 3 5 8968
Entity #25 | Chains: W
RIBOSOMAL PROTEIN L37AE protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68168
95 % 1 1 47244
90 % 1 1 44917
70 % 3 21 2827
50 % 7 30 1894
40 % 7 128 298
30 % 26 151 269
Entity #26 | Chains: X
RIBOSOMAL PROTEIN L37E protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 470
95 % 36 68 660
90 % 36 68 689
70 % 36 68 736
50 % 36 69 766
40 % 36 69 807
30 % 36 69 800
Entity #27 | Chains: Y
RIBOSOMAL PROTEIN L39E protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69569
95 % 36 68 661
90 % 36 68 690
70 % 36 68 737
50 % 36 172 203
40 % 36 172 228
30 % 36 172 234
Entity #28 | Chains: Z
RIBOSOMAL PROTEIN L44E protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 468
95 % 36 68 658
90 % 36 68 687
70 % 36 68 733
50 % 36 68 781
40 % 36 68 816
30 % 36 168 242
Entity #29 | Chains: 1
RIBOSOMAL PROTEIN L6 protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 462
95 % 36 68 649
90 % 36 68 677
70 % 36 68 721
50 % 36 68 775
40 % 36 173 224
30 % 44 500 34
Entity #3 | Chains: A
RIBOSOMAL PROTEIN L2 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2141
95 % 36 68 647
90 % 36 68 675
70 % 36 68 718
50 % 36 170 205
40 % 36 172 227
30 % 36 172 232
Entity #4 | Chains: B
RIBOSOMAL PROTEIN L3 protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51833
95 % 36 74 567
90 % 36 74 599
70 % 36 74 631
50 % 36 74 682
40 % 36 179 211
30 % 36 179 222
Entity #5 | Chains: C
RIBOSOMAL PROTEIN L4 protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9754
95 % 36 74 571
90 % 36 74 604
70 % 36 74 635
50 % 36 74 684
40 % 36 76 700
30 % 37 78 682
Entity #6 | Chains: D
RIBOSOMAL PROTEIN L5 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 415
95 % 36 74 576
90 % 36 74 607
70 % 36 74 637
50 % 36 74 686
40 % 37 179 212
30 % 37 179 224
Entity #7 | Chains: E
RIBOSOMAL PROTEIN L7AE protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2169
95 % 3 21 2798
90 % 36 68 683
70 % 36 68 728
50 % 51 105 319
40 % 58 122 276
30 % 58 124 277
Entity #8 | Chains: F
RIBOSOMAL PROTEIN L10E protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60793
95 % 1 1 42063
90 % 1 7 9846
70 % 3 27 2105
50 % 36 74 687
40 % 36 79 670
30 % 36 79 676
Entity #9 | Chains: G
RIBOSOMAL PROTEIN L13 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 417
95 % 36 74 578
90 % 36 74 609
70 % 36 74 642
50 % 36 74 692
40 % 37 77 693
30 % 37 78 685

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4V9F 22 T 50S ribosomal protein L24P 2238
2 1VQO 22 T 50S ribosomal protein L24P 2238
3 1VQ8 22 T 50S ribosomal protein L24P 2238
4 1S72 22 T 50S ribosomal protein L24P 2238
5 1JJ2 21 S RIBOSOMAL PROTEIN L24 2238
6 1YHQ 22 T 50S ribosomal protein L24P 2238
7 1VQP 22 T 50S ribosomal protein L24P 2238
8 1VQM 22 T 50S ribosomal protein L24P 2238
9 3CC2 20 T 50S ribosomal protein L24P 2238
10 1VQL 22 T 50S ribosomal protein L24P 2238
11 1VQK 22 T 50S ribosomal protein L24P 2238
12 1VQN 23 T 50S ribosomal protein L24P 2238
13 1YIJ 22 T 50S ribosomal protein L24P 2238
14 1YI2 22 T 50S ribosomal protein L24P 2238
15 1VQ9 22 T 50S ribosomal protein L24P 2238
16 1VQ7 22 T 50S ribosomal protein L24P 2238
17 3CCM 20 T 50S ribosomal protein L24P 2238
18 1VQ5 22 T 50S ribosomal protein L24P 2238
19 3CCJ 20 T 50S ribosomal protein L24P 2238
20 3CC7 20 T 50S ribosomal protein L24P 2238
21 1YIT 26 T 50S RIBOSOMAL PROTEIN L24P 2238
22 3CCE 20 T 50S ribosomal protein L24P 2238
23 3G6E 21 T 50S ribosomal protein L24P 2238
24 3CPW 21 S 50S ribosomal protein L24P 2238
25 3CCU 20 T 50S ribosomal protein L24P 2238
26 1VQ6 23 T 50S ribosomal protein L24P 2238
27 1M90 22 U RIBOSOMAL PROTEIN L24 2238
28 3CCL 20 T 50S ribosomal protein L24P 2238
29 1YJW 26 T 50S RIBOSOMAL PROTEIN L24P 2238
30 1YJ9 22 T 50S ribosomal protein L24P 2238
31 3CD6 20 T 50S ribosomal protein L24P 2238
32 3CCV 20 T 50S ribosomal protein L24P 2238
33 3CC4 20 T 50S ribosomal protein L24P 2238
34 2OTL 21 T 50S ribosomal protein L24P 2238
35 3G71 21 T 50S ribosomal protein L24P 2238
36 1FFK 19 Q RIBOSOMAL PROTEIN L24 2238
37 1VQ4 22 T 50S ribosomal protein L24P 2238
38 1YJN 22 T 50S ribosomal protein L24P 2238
39 3CMA 20 T 50S ribosomal protein L24P 2238
40 3CCS 20 T 50S ribosomal protein L24P 2238
41 3CCQ 20 T 50S ribosomal protein L24P 2238
42 3I56 20 T 50S ribosomal protein L24P 2238
43 3CCR 20 T 50S ribosomal protein L24P 2238
44 2OTJ 21 T 50S ribosomal protein L24P 2238
45 1KQS 23 S RIBOSOMAL PROTEIN L24 2238
46 3OW2 21 S 50S ribosomal protein L24P 2238
47 3CXC 22 S RIBOSOMAL PROTEIN L24 2238
48 1QVG 22 S 50S ribosomal protein L24P 2238
49 3CME 20 T 50S ribosomal protein L24P 2238
50 2QEX 21 T 50S ribosomal protein L24P 2238
51 1KC8 21 U RIBOSOMAL PROTEIN L24 2238
52 1N8R 21 U 50S ribosomal protein L24P 2238
53 1Q81 22 U 50S ribosomal protein L24P 2238
54 1Q82 22 U 50S ribosomal protein L24P 2238
55 1QVF 22 S 50S ribosomal protein L24P 2238
56 1NJI 21 U 50S ribosomal protein L24P 2238
57 1K73 21 U RIBOSOMAL PROTEIN L24 2238
58 1K9M 21 U RIBOSOMAL PROTEIN L24 2238
59 1KD1 21 U RIBOSOMAL PROTEIN L24 2238
60 3I55 21 T 50S ribosomal protein L24P 2238
61 1K8A 21 U RIBOSOMAL PROTEIN L24 2238
62 1Q86 22 U 50S ribosomal protein L24P 2238
63 1M1K 21 U RIBOSOMAL PROTEIN L24 2238
64 3G4S 21 T 50S ribosomal protein L24P 2238
65 1W2B 24 S RIBOSOMAL PROTEIN L24 2238
66 2QA4 22 T 50S ribosomal protein L24P 2238
67 1Q7Y 22 U 50S ribosomal protein L24P 2238
68 4V4P 20 AU 50S ribosomal protein L24 274
69 4V4R 42 BY 50S ribosomal protein 24 274
70 4V4S 42 BY 50S ribosomal protein 24 274
71 4V4T 41 BY 50S ribosomal protein 24 274
72 4ADX 30 T RPL24 145262
73 1ML5 42 u 50S RIBOSOMAL PROTEIN L24 562
74 4V42 44 BU 50S RIBOSOMAL PROTEIN L24 274