Sequence Similarity Clusters for the Entities in PDB 1FFK

Entity #1 | Chains: 0
23S RRNA rna, length: 2922 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: H
RIBOSOMAL PROTEIN L14 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 44 828
95 % 35 68 664
90 % 35 68 692
70 % 35 68 743
50 % 35 176 200
40 % 35 176 221
30 % 43 511 31
Entity #11 | Chains: I
RIBOSOMAL PROTEIN L15E protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59155
95 % 1 1 41219
90 % 1 1 39227
70 % 35 68 735
50 % 35 172 209
40 % 35 172 233
30 % 35 172 237
Entity #12 | Chains: J
RIBOSOMAL PROTEIN L15 protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 417
95 % 35 74 587
90 % 35 74 618
70 % 35 74 650
50 % 35 74 695
40 % 35 74 734
30 % 42 493 37
Entity #13 | Chains: K
RIBOSOMAL PROTEIN L18 protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 415
95 % 35 74 585
90 % 35 74 616
70 % 35 74 647
50 % 35 76 665
40 % 35 76 708
30 % 35 79 677
Entity #14 | Chains: L
RIBOSOMAL PROTEIN L18E protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 474
95 % 35 68 665
90 % 35 68 694
70 % 35 68 745
50 % 35 70 763
40 % 35 70 798
30 % 35 70 788
Entity #15 | Chains: M
RIBOSOMAL PROTEIN L19 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2178
95 % 35 68 663
90 % 35 68 690
70 % 35 68 741
50 % 35 68 793
40 % 35 72 762
30 % 35 72 754
Entity #16 | Chains: N
RIBOSOMAL PROTEIN L21E protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 475
95 % 35 68 668
90 % 35 68 696
70 % 35 68 748
50 % 35 70 765
40 % 35 70 800
30 % 35 71 770
Entity #17 | Chains: O
RIBOSOMAL PROTEIN L22 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 67 488
95 % 35 68 661
90 % 35 68 688
70 % 35 68 738
50 % 35 68 790
40 % 35 68 822
30 % 35 175 231
Entity #18 | Chains: P
RIBOSOMAL PROTEIN L23 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 422
95 % 35 74 591
90 % 35 74 622
70 % 35 74 656
50 % 35 76 669
40 % 35 78 691
30 % 42 400 60
Entity #19 | Chains: Q
RIBOSOMAL PROTEIN L24 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 421
95 % 35 74 590
90 % 35 74 621
70 % 35 74 655
50 % 35 180 197
40 % 35 180 216
30 % 35 180 225
Entity #2 | Chains: 9
5S RRNA rna, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: R
RIBOSOMAL PROTEIN L24E protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 33 70 451
95 % 33 70 635
90 % 33 70 663
70 % 33 70 717
50 % 33 70 766
40 % 33 70 803
30 % 33 70 792
Entity #21 | Chains: S
RIBOSOMAL PROTEIN L29 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 423
95 % 35 74 592
90 % 35 74 623
70 % 35 74 657
50 % 35 74 700
40 % 35 74 737
30 % 35 74 729
Entity #22 | Chains: T
RIBOSOMAL PROTEIN L30 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 472
95 % 35 68 662
90 % 35 68 689
70 % 35 68 739
50 % 35 68 791
40 % 35 70 795
30 % 35 71 767
Entity #23 | Chains: U
RIBOSOMAL PROTEIN L31E protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 477
95 % 35 68 670
90 % 35 68 698
70 % 35 68 750
50 % 35 68 796
40 % 35 68 826
30 % 35 68 813
Entity #24 | Chains: V
RIBOSOMAL PROTEIN L32E protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62504
95 % 3 5 14013
90 % 3 5 13756
70 % 3 5 12900
50 % 3 5 11510
40 % 3 5 10440
30 % 3 5 9050
Entity #25 | Chains: W
RIBOSOMAL PROTEIN L37AE protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68812
95 % 1 1 47669
90 % 1 1 45311
70 % 3 21 2859
50 % 7 30 1914
40 % 7 129 302
30 % 26 152 267
Entity #26 | Chains: X
RIBOSOMAL PROTEIN L37E protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 479
95 % 35 68 673
90 % 35 68 701
70 % 35 68 754
50 % 35 69 778
40 % 35 69 814
30 % 35 69 804
Entity #27 | Chains: Y
RIBOSOMAL PROTEIN L39E protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70221
95 % 35 68 674
90 % 35 68 702
70 % 35 68 755
50 % 35 173 205
40 % 35 173 228
30 % 35 173 234
Entity #28 | Chains: Z
RIBOSOMAL PROTEIN L44E protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 476
95 % 35 68 669
90 % 35 68 697
70 % 35 68 749
50 % 35 68 795
40 % 35 68 825
30 % 35 169 241
Entity #29 | Chains: 1
RIBOSOMAL PROTEIN L6 protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 471
95 % 35 68 660
90 % 35 68 687
70 % 35 68 737
50 % 35 68 789
40 % 35 174 226
30 % 43 502 34
Entity #3 | Chains: A
RIBOSOMAL PROTEIN L2 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2162
95 % 35 68 657
90 % 35 68 684
70 % 35 68 733
50 % 35 171 208
40 % 35 173 227
30 % 35 173 233
Entity #4 | Chains: B
RIBOSOMAL PROTEIN L3 protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52389
95 % 35 74 575
90 % 35 74 607
70 % 35 74 642
50 % 35 74 688
40 % 35 180 214
30 % 35 180 223
Entity #5 | Chains: C
RIBOSOMAL PROTEIN L4 protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9863
95 % 35 74 581
90 % 35 74 614
70 % 35 74 645
50 % 35 74 690
40 % 35 76 706
30 % 36 78 685
Entity #6 | Chains: D
RIBOSOMAL PROTEIN L5 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 416
95 % 35 74 586
90 % 35 74 617
70 % 35 74 648
50 % 35 74 693
40 % 36 180 215
30 % 36 180 224
Entity #7 | Chains: E
RIBOSOMAL PROTEIN L7AE protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2190
95 % 3 21 2831
90 % 35 68 693
70 % 35 68 744
50 % 50 105 322
40 % 57 122 279
30 % 57 124 282
Entity #8 | Chains: F
RIBOSOMAL PROTEIN L10E protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61408
95 % 1 1 42472
90 % 1 7 9964
70 % 3 27 2129
50 % 35 74 694
40 % 35 79 678
30 % 35 79 679
Entity #9 | Chains: G
RIBOSOMAL PROTEIN L13 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 418
95 % 35 74 588
90 % 35 74 619
70 % 35 74 653
50 % 35 74 699
40 % 36 77 701
30 % 36 78 688

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4V9F 18 P 50S ribosomal protein L19e 2238
2 1VQO 18 P 50S ribosomal protein L19E 2238
3 1VQ8 18 P 50S ribosomal protein L19E 2238
4 1S72 18 P 50S ribosomal protein L19E 2238
5 1JJ2 17 O RIBOSOMAL PROTEIN L19E 2238
6 1YHQ 18 P 50S ribosomal protein L19E 2238
7 1VQP 18 P 50S ribosomal protein L19E 2238
8 1VQM 18 P 50S ribosomal protein L19E 2238
9 3CC2 16 P 50S ribosomal protein L19e 2238
10 1VQL 18 P 50S ribosomal protein L19E 2238
11 1VQK 18 P 50S ribosomal protein L19E 2238
12 1VQN 19 P 50S ribosomal protein L19E 2238
13 1YIJ 18 P 50S ribosomal protein L19E 2238
14 1YI2 18 P 50S ribosomal protein L19E 2238
15 1VQ9 18 P 50S ribosomal protein L19E 2238
16 1VQ7 18 P 50S ribosomal protein L19E 2238
17 3CCM 16 P 50S ribosomal protein L19e 2238
18 1VQ5 18 P 50S ribosomal protein L19E 2238
19 3CC7 16 P 50S ribosomal protein L19e 2238
20 1YIT 22 P 50S RIBOSOMAL PROTEIN L19E 2238
21 3CCE 16 P 50S ribosomal protein L19e 2238
22 3G6E 17 P 50S ribosomal protein L19e 2238
23 3CPW 17 O 50S ribosomal protein L19e 2238
24 3CCU 16 P 50S ribosomal protein L19e 2238
25 1VQ6 19 P 50S ribosomal protein L19E 2238
26 1M90 18 Q RIBOSOMAL PROTEIN L19E 2238
27 3CCL 16 P 50S ribosomal protein L19e 2238
28 1YJW 22 P 50S RIBOSOMAL PROTEIN L19E 2238
29 1YJ9 18 P 50S ribosomal protein L19E 2238
30 3CD6 16 P 50S ribosomal protein L19e 2238
31 3CCV 16 P 50S ribosomal protein L19e 2238
32 3CC4 16 P 50S ribosomal protein L19e 2238
33 2OTL 17 P 50S ribosomal protein L19e 2238
34 3G71 17 P 50S ribosomal protein L19e 2238
35 1FFK 15 M RIBOSOMAL PROTEIN L19 2238
36 1VQ4 18 P 50S ribosomal protein L19E 2238
37 1YJN 18 P 50S ribosomal protein L19E 2238
38 3CMA 16 P 50S ribosomal protein L19e 2238
39 3CCS 16 P 50S ribosomal protein L19e 2238
40 3CCQ 16 P 50S ribosomal protein L19e 2238
41 3I56 16 P 50S ribosomal protein L19e 2238
42 3CCR 16 P 50S ribosomal protein L19e 2238
43 2OTJ 17 P 50S ribosomal protein L19e 2238
44 1KQS 19 O RIBOSOMAL PROTEIN L19E 2238
45 3OW2 17 O 50S ribosomal protein L19e 2238
46 3CXC 18 O RIBOSOMAL PROTEIN L19E 2238
47 1QVG 18 O 50S ribosomal protein L19E 2238
48 3CME 16 P 50S ribosomal protein L19e 2238
49 2QEX 17 P 50S ribosomal protein L19e 2238
50 1KC8 17 Q RIBOSOMAL PROTEIN L19E 2238
51 1N8R 17 Q 50S ribosomal protein L19E 2238
52 1Q81 18 Q 50S ribosomal protein L19E 2238
53 1Q82 18 Q 50S ribosomal protein L19E 2238
54 1QVF 18 O 50S ribosomal protein L19E 2238
55 1NJI 17 Q 50S ribosomal protein L19E 2238
56 1K73 17 Q RIBOSOMAL PROTEIN L19E 2238
57 1K9M 17 Q RIBOSOMAL PROTEIN L19E 2238
58 1KD1 17 Q RIBOSOMAL PROTEIN L19E 2238
59 3I55 17 P 50S ribosomal protein L19e 2238
60 1K8A 17 Q RIBOSOMAL PROTEIN L19E 2238
61 1Q86 18 Q 50S ribosomal protein L19E 2238
62 1M1K 17 Q RIBOSOMAL PROTEIN L19E 2238
63 3G4S 17 P 50S ribosomal protein L19e 2238
64 3CCJ 16 P 50S ribosomal protein L19e 2238
65 1W2B 20 O 50S RIBOSOMAL PROTEIN L19E 2238
66 2QA4 18 P 50S ribosomal protein L19e 2238
67 1Q7Y 18 Q 50S ribosomal protein L19E 2238
68 4ADX 26 P RPL19E 145262