Sequence Similarity Clusters for the Entities in PDB 1FFK

Entity #1 | Chains: 0
23S RRNA rna, length: 2922 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: H
RIBOSOMAL PROTEIN L14 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 44 803
95 % 36 68 636
90 % 36 68 663
70 % 36 68 705
50 % 36 174 198
40 % 36 174 217
30 % 44 506 29
Entity #11 | Chains: I
RIBOSOMAL PROTEIN L15E protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57975
95 % 1 1 40414
90 % 1 1 38488
70 % 36 68 697
50 % 36 170 205
40 % 36 170 227
30 % 36 170 233
Entity #12 | Chains: J
RIBOSOMAL PROTEIN L15 protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 403
95 % 36 74 563
90 % 36 74 591
70 % 36 74 623
50 % 36 74 672
40 % 36 74 711
30 % 43 488 35
Entity #13 | Chains: K
RIBOSOMAL PROTEIN L18 protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 401
95 % 36 74 561
90 % 36 74 589
70 % 36 74 620
50 % 36 76 651
40 % 36 76 693
30 % 36 79 665
Entity #14 | Chains: L
RIBOSOMAL PROTEIN L18E protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 451
95 % 36 68 637
90 % 36 68 665
70 % 36 68 707
50 % 36 70 729
40 % 36 70 766
30 % 36 70 765
Entity #15 | Chains: M
RIBOSOMAL PROTEIN L19 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2128
95 % 36 68 635
90 % 36 68 661
70 % 36 68 703
50 % 36 68 754
40 % 36 72 737
30 % 36 72 736
Entity #16 | Chains: N
RIBOSOMAL PROTEIN L21E protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 453
95 % 36 68 640
90 % 36 68 667
70 % 36 68 711
50 % 36 70 730
40 % 36 70 767
30 % 36 71 749
Entity #17 | Chains: O
RIBOSOMAL PROTEIN L22 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 67 462
95 % 36 68 633
90 % 36 68 659
70 % 36 68 700
50 % 36 68 751
40 % 36 68 785
30 % 36 173 226
Entity #18 | Chains: P
RIBOSOMAL PROTEIN L23 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 410
95 % 36 74 569
90 % 36 74 596
70 % 36 74 630
50 % 36 76 654
40 % 36 78 670
30 % 43 397 57
Entity #19 | Chains: Q
RIBOSOMAL PROTEIN L24 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 407
95 % 36 74 566
90 % 36 74 594
70 % 36 74 628
50 % 36 178 191
40 % 36 178 208
30 % 36 178 221
Entity #2 | Chains: 9
5S RRNA rna, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: R
RIBOSOMAL PROTEIN L24E protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 70 434
95 % 34 70 615
90 % 34 70 641
70 % 34 70 680
50 % 34 70 731
40 % 34 70 769
30 % 34 70 767
Entity #21 | Chains: S
RIBOSOMAL PROTEIN L29 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 412
95 % 36 74 570
90 % 36 74 597
70 % 36 74 631
50 % 36 74 678
40 % 36 74 715
30 % 36 74 715
Entity #22 | Chains: T
RIBOSOMAL PROTEIN L30 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 449
95 % 36 68 634
90 % 36 68 660
70 % 36 68 701
50 % 36 68 752
40 % 36 70 763
30 % 36 71 746
Entity #23 | Chains: U
RIBOSOMAL PROTEIN L31E protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 455
95 % 36 68 642
90 % 36 68 669
70 % 36 68 713
50 % 36 68 759
40 % 36 68 790
30 % 36 68 788
Entity #24 | Chains: V
RIBOSOMAL PROTEIN L32E protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61284
95 % 3 5 13704
90 % 3 5 13456
70 % 3 5 12623
50 % 3 5 11286
40 % 3 5 10238
30 % 3 5 8890
Entity #25 | Chains: W
RIBOSOMAL PROTEIN L37AE protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67529
95 % 1 1 46810
90 % 1 1 44529
70 % 3 21 2798
50 % 7 30 1870
40 % 7 127 292
30 % 26 150 262
Entity #26 | Chains: X
RIBOSOMAL PROTEIN L37E protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 456
95 % 36 68 643
90 % 36 68 670
70 % 36 68 716
50 % 36 69 739
40 % 36 69 779
30 % 36 69 778
Entity #27 | Chains: Y
RIBOSOMAL PROTEIN L39E protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68924
95 % 36 68 644
90 % 36 68 671
70 % 36 68 717
50 % 36 171 201
40 % 36 171 224
30 % 36 171 231
Entity #28 | Chains: Z
RIBOSOMAL PROTEIN L44E protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 454
95 % 36 68 641
90 % 36 68 668
70 % 36 68 712
50 % 36 68 758
40 % 36 68 789
30 % 36 167 237
Entity #29 | Chains: 1
RIBOSOMAL PROTEIN L6 protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 448
95 % 36 68 632
90 % 36 68 658
70 % 36 68 699
50 % 36 68 750
40 % 36 172 221
30 % 44 497 32
Entity #3 | Chains: A
RIBOSOMAL PROTEIN L2 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2112
95 % 36 68 630
90 % 36 68 656
70 % 36 68 696
50 % 36 169 204
40 % 36 171 223
30 % 36 171 230
Entity #4 | Chains: B
RIBOSOMAL PROTEIN L3 protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51315
95 % 36 74 552
90 % 36 74 582
70 % 36 74 615
50 % 36 74 666
40 % 36 178 205
30 % 36 178 218
Entity #5 | Chains: C
RIBOSOMAL PROTEIN L4 protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9655
95 % 36 74 556
90 % 36 74 586
70 % 36 74 619
50 % 36 74 668
40 % 36 76 691
30 % 37 78 674
Entity #6 | Chains: D
RIBOSOMAL PROTEIN L5 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 402
95 % 36 74 562
90 % 36 74 590
70 % 36 74 621
50 % 36 74 670
40 % 37 178 207
30 % 37 178 220
Entity #7 | Chains: E
RIBOSOMAL PROTEIN L7AE protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2139
95 % 3 21 2768
90 % 36 68 664
70 % 36 68 706
50 % 51 105 311
40 % 58 120 281
30 % 58 122 278
Entity #8 | Chains: F
RIBOSOMAL PROTEIN L10E protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60207
95 % 1 1 41656
90 % 1 7 9757
70 % 3 27 2078
50 % 36 74 671
40 % 36 79 658
30 % 36 79 668
Entity #9 | Chains: G
RIBOSOMAL PROTEIN L13 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 404
95 % 36 74 564
90 % 36 74 592
70 % 36 74 626
50 % 36 74 676
40 % 37 77 681
30 % 37 78 677

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4V9F 14 L 50S ribosomal protein L15P 2238
2 1VQO 14 L 50S ribosomal protein L15P 2238
3 1VQ8 14 L 50S ribosomal protein L15P 2238
4 1S72 14 L 50S ribosomal protein L15P 2238
5 1JJ2 13 K RIBOSOMAL PROTEIN L15 2238
6 1YHQ 14 L 50S ribosomal protein L15P 2238
7 1VQP 14 L 50S ribosomal protein L15P 2238
8 1VQM 14 L 50S ribosomal protein L15P 2238
9 3CC2 12 L 50S ribosomal protein L15P 2238
10 1VQL 14 L 50S ribosomal protein L15P 2238
11 1VQK 14 L 50S ribosomal protein L15P 2238
12 1VQN 15 L 50S ribosomal protein L15P 2238
13 1YIJ 14 L 50S ribosomal protein L15P 2238
14 1YI2 14 L 50S ribosomal protein L15P 2238
15 1VQ9 14 L 50S ribosomal protein L15P 2238
16 1VQ7 14 L 50S ribosomal protein L15P 2238
17 3CCM 12 L 50S ribosomal protein L15P 2238
18 1VQ5 14 L 50S ribosomal protein L15P 2238
19 3CCJ 12 L 50S ribosomal protein L15P 2238
20 3CC7 12 L 50S ribosomal protein L15P 2238
21 1YIT 18 L 50S RIBOSOMAL PROTEIN L15P 2238
22 3CCE 12 L 50S ribosomal protein L15P 2238
23 3G6E 13 L 50S ribosomal protein L15P 2238
24 3CPW 13 K 50S ribosomal protein L15P 2238
25 3CCU 12 L 50S ribosomal protein L15P 2238
26 1VQ6 15 L 50S ribosomal protein L15P 2238
27 1M90 14 M RIBOSOMAL PROTEIN L15 2238
28 3CCL 12 L 50S ribosomal protein L15P 2238
29 1YJW 18 L 50S RIBOSOMAL PROTEIN L15P 2238
30 1YJ9 14 L 50S ribosomal protein L15P 2238
31 3CD6 12 L 50S ribosomal protein L15P 2238
32 3CCV 12 L 50S ribosomal protein L15P 2238
33 3CC4 12 L 50S ribosomal protein L15P 2238
34 2OTL 13 L 50S ribosomal protein L15P 2238
35 3G71 13 L 50S ribosomal protein L15P 2238
36 1FFK 12 J RIBOSOMAL PROTEIN L15 2238
37 1VQ4 14 L 50S ribosomal protein L15P 2238
38 1YJN 14 L 50S ribosomal protein L15P 2238
39 3CMA 12 L 50S ribosomal protein L15P 2238
40 3CCS 12 L 50S ribosomal protein L15P 2238
41 3CCQ 12 L 50S ribosomal protein L15P 2238
42 3I56 12 L 50S ribosomal protein L15P 2238
43 3CCR 12 L 50S ribosomal protein L15P 2238
44 2OTJ 13 L 50S ribosomal protein L15P 2238
45 1KQS 15 K RIBOSOMAL PROTEIN L15 2238
46 3OW2 13 K 50S ribosomal protein L15P 2238
47 3CXC 14 K RIBOSOMAL PROTEIN L15 2238
48 1QVG 14 K 50S ribosomal protein L15P 2238
49 3CME 12 L 50S ribosomal protein L15P 2238
50 2QEX 13 L 50S ribosomal protein L15P 2238
51 1KC8 13 M RIBOSOMAL PROTEIN L15 2238
52 1N8R 13 M 50S ribosomal protein L15P 2238
53 1Q81 14 M 50S ribosomal protein L15P 2238
54 1Q82 14 M 50S ribosomal protein L15P 2238
55 1QVF 14 K 50S ribosomal protein L15P 2238
56 1NJI 13 M 50S ribosomal protein L15P 2238
57 1K73 13 M RIBOSOMAL PROTEIN L15 2238
58 1K9M 13 M RIBOSOMAL PROTEIN L15 2238
59 1KD1 13 M RIBOSOMAL PROTEIN L15 2238
60 3I55 13 L 50S ribosomal protein L15P 2238
61 1K8A 13 M RIBOSOMAL PROTEIN L15 2238
62 1Q86 14 M 50S ribosomal protein L15P 2238
63 1M1K 13 M RIBOSOMAL PROTEIN L15 2238
64 3G4S 13 L 50S ribosomal protein L15P 2238
65 1W2B 16 K 50S RIBOSOMAL PROTEIN L15P 2238
66 2QA4 14 L 50S ribosomal protein L15P 2238
67 1Q7Y 14 M 50S ribosomal protein L15P 2238
68 4V4P 14 AO 50S ribosomal protein L15 274
69 4V4R 36 BP 50S ribosomal protein L15 274
70 4V4S 36 BP 50S ribosomal protein L15 274
71 4V4T 35 BP 50S ribosomal protein L15 274
72 4ADX 22 L RPL15 145262
73 1ML5 36 o 50S RIBOSOMAL PROTEIN L15 562
74 4V42 38 BO 50S RIBOSOMAL PROTEIN L15 274