Sequence Similarity Clusters for the Entities in PDB 1FFK

Entity #1 | Chains: 0
23S RRNA rna, length: 2922 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: H
RIBOSOMAL PROTEIN L14 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 44 863
95 % 35 68 697
90 % 35 68 727
70 % 35 68 779
50 % 35 180 201
40 % 43 537 20
30 % 43 537 33
Entity #11 | Chains: I
RIBOSOMAL PROTEIN L15E protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60907
95 % 1 1 42489
90 % 1 1 40386
70 % 35 68 770
50 % 35 176 205
40 % 35 176 227
30 % 35 176 238
Entity #12 | Chains: J
RIBOSOMAL PROTEIN L15 protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 446
95 % 35 74 618
90 % 35 74 646
70 % 35 74 689
50 % 35 74 741
40 % 35 74 775
30 % 42 517 37
Entity #13 | Chains: K
RIBOSOMAL PROTEIN L18 protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 444
95 % 35 74 616
90 % 35 74 644
70 % 35 74 686
50 % 35 76 716
40 % 35 76 751
30 % 35 79 713
Entity #14 | Chains: L
RIBOSOMAL PROTEIN L18E protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 513
95 % 35 68 699
90 % 35 68 730
70 % 35 68 782
50 % 35 70 793
40 % 35 70 830
30 % 35 70 817
Entity #15 | Chains: M
RIBOSOMAL PROTEIN L19 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2256
95 % 35 68 696
90 % 35 68 725
70 % 35 68 777
50 % 35 68 821
40 % 35 72 803
30 % 35 72 793
Entity #16 | Chains: N
RIBOSOMAL PROTEIN L21E protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 514
95 % 35 68 701
90 % 35 68 732
70 % 35 68 784
50 % 35 70 794
40 % 35 70 831
30 % 35 71 806
Entity #17 | Chains: O
RIBOSOMAL PROTEIN L22 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 67 523
95 % 35 68 694
90 % 35 68 723
70 % 35 68 774
50 % 35 68 818
40 % 35 68 854
30 % 35 179 230
Entity #18 | Chains: P
RIBOSOMAL PROTEIN L23 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 451
95 % 35 74 622
90 % 35 74 650
70 % 35 74 696
50 % 35 76 721
40 % 35 78 729
30 % 42 420 58
Entity #19 | Chains: Q
RIBOSOMAL PROTEIN L24 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 450
95 % 35 74 621
90 % 35 74 649
70 % 35 74 694
50 % 35 183 199
40 % 35 184 217
30 % 35 184 226
Entity #2 | Chains: 9
5S RRNA rna, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: R
RIBOSOMAL PROTEIN L24E protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 33 70 483
95 % 33 70 668
90 % 33 70 693
70 % 33 70 746
50 % 33 70 795
40 % 33 70 832
30 % 33 70 819
Entity #21 | Chains: S
RIBOSOMAL PROTEIN L29 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 452
95 % 35 74 623
90 % 35 74 651
70 % 35 74 697
50 % 35 74 746
40 % 42 384 58
30 % 42 410 65
Entity #22 | Chains: T
RIBOSOMAL PROTEIN L30 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 510
95 % 35 68 695
90 % 35 68 724
70 % 35 68 775
50 % 35 68 819
40 % 35 70 828
30 % 35 71 804
Entity #23 | Chains: U
RIBOSOMAL PROTEIN L31E protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 516
95 % 35 68 703
90 % 35 68 734
70 % 35 68 786
50 % 35 68 826
40 % 35 68 858
30 % 35 68 842
Entity #24 | Chains: V
RIBOSOMAL PROTEIN L32E protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64339
95 % 3 5 14477
90 % 3 5 14204
70 % 3 5 13347
50 % 3 5 11870
40 % 3 5 10769
30 % 3 5 9344
Entity #25 | Chains: W
RIBOSOMAL PROTEIN L37AE protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70754
95 % 1 1 49075
90 % 1 1 46601
70 % 3 21 2952
50 % 7 30 1977
40 % 7 134 287
30 % 26 157 261
Entity #26 | Chains: X
RIBOSOMAL PROTEIN L37E protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 517
95 % 35 68 704
90 % 35 68 735
70 % 35 68 787
50 % 35 69 808
40 % 35 69 843
30 % 35 69 832
Entity #27 | Chains: Y
RIBOSOMAL PROTEIN L39E protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72191
95 % 35 68 705
90 % 35 68 736
70 % 35 68 788
50 % 35 177 203
40 % 35 177 225
30 % 35 177 235
Entity #28 | Chains: Z
RIBOSOMAL PROTEIN L44E protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 515
95 % 35 68 702
90 % 35 68 733
70 % 35 68 785
50 % 35 68 825
40 % 35 68 857
30 % 35 173 243
Entity #29 | Chains: 1
RIBOSOMAL PROTEIN L6 protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 68 509
95 % 35 68 693
90 % 35 68 721
70 % 35 68 772
50 % 35 68 817
40 % 35 178 222
30 % 43 528 36
Entity #3 | Chains: A
RIBOSOMAL PROTEIN L2 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2239
95 % 35 68 691
90 % 35 68 719
70 % 35 68 769
50 % 35 175 204
40 % 35 177 224
30 % 35 177 234
Entity #4 | Chains: B
RIBOSOMAL PROTEIN L3 protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53997
95 % 35 74 608
90 % 35 74 638
70 % 35 74 682
50 % 35 74 734
40 % 35 184 215
30 % 35 184 224
Entity #5 | Chains: C
RIBOSOMAL PROTEIN L4 protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 10221
95 % 35 74 612
90 % 35 74 642
70 % 35 74 684
50 % 35 74 736
40 % 35 76 749
30 % 36 78 721
Entity #6 | Chains: D
RIBOSOMAL PROTEIN L5 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 445
95 % 35 74 617
90 % 35 74 645
70 % 35 74 687
50 % 35 74 739
40 % 36 184 216
30 % 36 184 225
Entity #7 | Chains: E
RIBOSOMAL PROTEIN L7AE protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2269
95 % 3 21 2913
90 % 35 68 729
70 % 35 68 781
50 % 50 105 349
40 % 57 124 285
30 % 57 126 289
Entity #8 | Chains: F
RIBOSOMAL PROTEIN L10E protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63212
95 % 1 1 43778
90 % 1 7 10332
70 % 3 27 2207
50 % 35 74 740
40 % 35 79 720
30 % 35 79 715
Entity #9 | Chains: G
RIBOSOMAL PROTEIN L13 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 74 448
95 % 35 74 619
90 % 35 74 647
70 % 35 74 692
50 % 35 74 745
40 % 36 77 740
30 % 36 78 725

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4V9F 14 L 50S ribosomal protein L15P 2238
2 1VQO 14 L 50S ribosomal protein L15P 2238
3 1VQ8 14 L 50S ribosomal protein L15P 2238
4 1S72 14 L 50S ribosomal protein L15P 2238
5 1JJ2 13 K RIBOSOMAL PROTEIN L15 2238
6 1YHQ 14 L 50S ribosomal protein L15P 2238
7 1VQP 14 L 50S ribosomal protein L15P 2238
8 1VQM 14 L 50S ribosomal protein L15P 2238
9 3CC2 12 L 50S ribosomal protein L15P 2238
10 1VQL 14 L 50S ribosomal protein L15P 2238
11 1VQK 14 L 50S ribosomal protein L15P 2238
12 1VQN 15 L 50S ribosomal protein L15P 2238
13 1YIJ 14 L 50S ribosomal protein L15P 2238
14 1YI2 14 L 50S ribosomal protein L15P 2238
15 1VQ9 14 L 50S ribosomal protein L15P 2238
16 1VQ7 14 L 50S ribosomal protein L15P 2238
17 3CCM 12 L 50S ribosomal protein L15P 2238
18 1VQ5 14 L 50S ribosomal protein L15P 2238
19 3CC7 12 L 50S ribosomal protein L15P 2238
20 1YIT 18 L 50S RIBOSOMAL PROTEIN L15P 2238
21 3CCE 12 L 50S ribosomal protein L15P 2238
22 3G6E 13 L 50S ribosomal protein L15P 2238
23 3CPW 13 K 50S ribosomal protein L15P 2238
24 3CCU 12 L 50S ribosomal protein L15P 2238
25 1VQ6 15 L 50S ribosomal protein L15P 2238
26 1M90 14 M RIBOSOMAL PROTEIN L15 2238
27 3CCL 12 L 50S ribosomal protein L15P 2238
28 1YJW 18 L 50S RIBOSOMAL PROTEIN L15P 2238
29 1YJ9 14 L 50S ribosomal protein L15P 2238
30 3CD6 12 L 50S ribosomal protein L15P 2238
31 3CCV 12 L 50S ribosomal protein L15P 2238
32 3CC4 12 L 50S ribosomal protein L15P 2238
33 2OTL 13 L 50S ribosomal protein L15P 2238
34 3G71 13 L 50S ribosomal protein L15P 2238
35 1FFK 12 J RIBOSOMAL PROTEIN L15 2238
36 1VQ4 14 L 50S ribosomal protein L15P 2238
37 1YJN 14 L 50S ribosomal protein L15P 2238
38 3CMA 12 L 50S ribosomal protein L15P 2238
39 3CCS 12 L 50S ribosomal protein L15P 2238
40 3CCQ 12 L 50S ribosomal protein L15P 2238
41 3I56 12 L 50S ribosomal protein L15P 2238
42 3CCR 12 L 50S ribosomal protein L15P 2238
43 2OTJ 13 L 50S ribosomal protein L15P 2238
44 1KQS 15 K RIBOSOMAL PROTEIN L15 2238
45 3OW2 13 K 50S ribosomal protein L15P 2238
46 3CXC 14 K RIBOSOMAL PROTEIN L15 2238
47 1QVG 14 K 50S ribosomal protein L15P 2238
48 3CME 12 L 50S ribosomal protein L15P 2238
49 2QEX 13 L 50S ribosomal protein L15P 2238
50 1KC8 13 M RIBOSOMAL PROTEIN L15 2238
51 1N8R 13 M 50S ribosomal protein L15P 2238
52 1Q81 14 M 50S ribosomal protein L15P 2238
53 1Q82 14 M 50S ribosomal protein L15P 2238
54 1QVF 14 K 50S ribosomal protein L15P 2238
55 1NJI 13 M 50S ribosomal protein L15P 2238
56 1K73 13 M RIBOSOMAL PROTEIN L15 2238
57 1K9M 13 M RIBOSOMAL PROTEIN L15 2238
58 1KD1 13 M RIBOSOMAL PROTEIN L15 2238
59 3I55 13 L 50S ribosomal protein L15P 2238
60 1K8A 13 M RIBOSOMAL PROTEIN L15 2238
61 1Q86 14 M 50S ribosomal protein L15P 2238
62 1M1K 13 M RIBOSOMAL PROTEIN L15 2238
63 3G4S 13 L 50S ribosomal protein L15P 2238
64 3CCJ 12 L 50S ribosomal protein L15P 2238
65 1W2B 16 K 50S RIBOSOMAL PROTEIN L15P 2238
66 2QA4 14 L 50S ribosomal protein L15P 2238
67 1Q7Y 14 M 50S ribosomal protein L15P 2238
68 4V4P 14 AO 50S ribosomal protein L15 274
69 4V4R 36 BP 50S ribosomal protein L15 274
70 4V4S 36 BP 50S ribosomal protein L15 274
71 4V4T 35 BP 50S ribosomal protein L15 274
72 4ADX 22 L RPL15 145262
73 1ML5 36 o 50S RIBOSOMAL PROTEIN L15 562
74 4V42 38 BO 50S RIBOSOMAL PROTEIN L15 274