Sequence Similarity Clusters for the Entities in PDB 1FFK

Entity #1 | Chains: 0
23S RRNA rna, length: 2922 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: H
RIBOSOMAL PROTEIN L14 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 44 799
95 % 36 68 630
90 % 36 68 658
70 % 36 68 695
50 % 36 165 207
40 % 36 165 228
30 % 44 492 30
Entity #11 | Chains: I
RIBOSOMAL PROTEIN L15E protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57423
95 % 1 1 40003
90 % 1 1 38094
70 % 36 68 687
50 % 36 161 215
40 % 36 161 237
30 % 36 161 246
Entity #12 | Chains: J
RIBOSOMAL PROTEIN L15 protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 374
95 % 36 74 538
90 % 36 74 578
70 % 36 74 610
50 % 36 74 663
40 % 36 74 706
30 % 43 478 36
Entity #13 | Chains: K
RIBOSOMAL PROTEIN L18 protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 371
95 % 36 74 535
90 % 36 74 576
70 % 36 74 607
50 % 36 76 643
40 % 36 76 688
30 % 36 79 663
Entity #14 | Chains: L
RIBOSOMAL PROTEIN L18E protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 445
95 % 36 68 631
90 % 36 68 660
70 % 36 68 697
50 % 36 70 717
40 % 36 70 756
30 % 36 70 758
Entity #15 | Chains: M
RIBOSOMAL PROTEIN L19 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2109
95 % 36 68 629
90 % 36 68 657
70 % 36 68 693
50 % 36 68 747
40 % 36 72 728
30 % 36 72 726
Entity #16 | Chains: N
RIBOSOMAL PROTEIN L21E protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 447
95 % 36 68 634
90 % 36 68 662
70 % 36 68 700
50 % 36 70 718
40 % 36 70 757
30 % 36 71 742
Entity #17 | Chains: O
RIBOSOMAL PROTEIN L22 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 67 457
95 % 36 68 627
90 % 36 68 655
70 % 36 68 690
50 % 36 68 744
40 % 36 68 776
30 % 36 164 236
Entity #18 | Chains: P
RIBOSOMAL PROTEIN L23 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 380
95 % 36 74 543
90 % 36 74 583
70 % 36 74 618
50 % 36 76 646
40 % 36 78 665
30 % 43 396 56
Entity #19 | Chains: Q
RIBOSOMAL PROTEIN L24 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 379
95 % 36 74 542
90 % 36 74 582
70 % 36 74 617
50 % 36 169 202
40 % 36 169 223
30 % 36 169 231
Entity #2 | Chains: 9
5S RRNA rna, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: R
RIBOSOMAL PROTEIN L24E protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 70 420
95 % 34 70 603
90 % 34 70 634
70 % 34 70 667
50 % 34 70 720
40 % 34 70 760
30 % 34 70 761
Entity #21 | Chains: S
RIBOSOMAL PROTEIN L29 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 381
95 % 36 74 544
90 % 36 74 584
70 % 36 74 619
50 % 36 74 667
40 % 36 74 709
30 % 36 74 708
Entity #22 | Chains: T
RIBOSOMAL PROTEIN L30 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 441
95 % 36 68 628
90 % 36 68 656
70 % 36 68 691
50 % 36 68 745
40 % 36 70 753
30 % 36 71 740
Entity #23 | Chains: U
RIBOSOMAL PROTEIN L31E protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 449
95 % 36 68 636
90 % 36 68 664
70 % 36 68 702
50 % 36 68 751
40 % 36 68 780
30 % 36 68 783
Entity #24 | Chains: V
RIBOSOMAL PROTEIN L32E protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60704
95 % 3 5 13581
90 % 3 5 13337
70 % 3 5 12515
50 % 3 5 11186
40 % 3 5 10154
30 % 3 5 8815
Entity #25 | Chains: W
RIBOSOMAL PROTEIN L37AE protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66925
95 % 1 1 46366
90 % 1 1 44112
70 % 3 21 2776
50 % 7 30 1854
40 % 7 118 316
30 % 26 141 271
Entity #26 | Chains: X
RIBOSOMAL PROTEIN L37E protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 452
95 % 36 68 638
90 % 36 68 665
70 % 36 68 704
50 % 36 69 730
40 % 36 69 770
30 % 36 69 774
Entity #27 | Chains: Y
RIBOSOMAL PROTEIN L39E protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68310
95 % 36 68 639
90 % 36 68 666
70 % 36 68 706
50 % 36 162 213
40 % 36 162 236
30 % 36 162 241
Entity #28 | Chains: Z
RIBOSOMAL PROTEIN L44E protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 448
95 % 36 68 635
90 % 36 68 663
70 % 36 68 701
50 % 36 68 750
40 % 36 68 779
30 % 36 158 250
Entity #29 | Chains: 1
RIBOSOMAL PROTEIN L6 protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 440
95 % 36 68 626
90 % 36 68 654
70 % 36 68 689
50 % 36 68 742
40 % 36 163 231
30 % 44 483 34
Entity #3 | Chains: A
RIBOSOMAL PROTEIN L2 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2089
95 % 36 68 623
90 % 36 68 651
70 % 36 68 686
50 % 36 160 214
40 % 36 162 233
30 % 36 162 238
Entity #4 | Chains: B
RIBOSOMAL PROTEIN L3 protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50803
95 % 36 74 530
90 % 36 74 570
70 % 36 74 602
50 % 36 74 656
40 % 36 169 220
30 % 36 169 228
Entity #5 | Chains: C
RIBOSOMAL PROTEIN L4 protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9580
95 % 36 74 532
90 % 36 74 572
70 % 36 74 606
50 % 36 74 659
40 % 36 76 686
30 % 36 77 681
Entity #6 | Chains: D
RIBOSOMAL PROTEIN L5 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 372
95 % 36 74 536
90 % 36 74 577
70 % 36 74 608
50 % 36 74 661
40 % 37 169 222
30 % 37 169 229
Entity #7 | Chains: E
RIBOSOMAL PROTEIN L7AE protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2119
95 % 3 21 2745
90 % 36 68 659
70 % 36 68 696
50 % 51 105 308
40 % 58 120 279
30 % 58 122 278
Entity #8 | Chains: F
RIBOSOMAL PROTEIN L10E protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59639
95 % 1 1 41239
90 % 1 7 9677
70 % 3 27 2053
50 % 36 74 662
40 % 36 79 653
30 % 36 79 666
Entity #9 | Chains: G
RIBOSOMAL PROTEIN L13 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 375
95 % 36 74 539
90 % 36 74 579
70 % 36 74 613
50 % 36 74 666
40 % 37 77 677
30 % 37 78 673

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1FFK 11 I RIBOSOMAL PROTEIN L15E 2238