Sequence Similarity Clusters for the Entities in PDB 1FFK

Entity #1 | Chains: 0
23S RRNA rna, length: 2922 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: H
RIBOSOMAL PROTEIN L14 protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 17 44 786
95 % 36 68 607
90 % 36 68 641
70 % 36 68 681
50 % 36 163 208
40 % 36 163 229
30 % 44 479 31
Entity #11 | Chains: I
RIBOSOMAL PROTEIN L15E protein, length: 194 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56903
95 % 1 1 39657
90 % 1 1 37770
70 % 36 68 675
50 % 36 159 215
40 % 36 159 237
30 % 36 159 249
Entity #12 | Chains: J
RIBOSOMAL PROTEIN L15 protein, length: 164 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 344
95 % 36 74 508
90 % 36 74 542
70 % 36 74 580
50 % 36 74 654
40 % 36 74 700
30 % 43 468 38
Entity #13 | Chains: K
RIBOSOMAL PROTEIN L18 protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 342
95 % 36 74 506
90 % 36 74 538
70 % 36 74 576
50 % 36 76 634
40 % 36 76 678
30 % 36 79 657
Entity #14 | Chains: L
RIBOSOMAL PROTEIN L18E protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 418
95 % 36 68 609
90 % 36 68 643
70 % 36 68 683
50 % 36 70 705
40 % 36 70 746
30 % 36 70 750
Entity #15 | Chains: M
RIBOSOMAL PROTEIN L19 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2083
95 % 36 68 605
90 % 36 68 640
70 % 36 68 680
50 % 36 68 733
40 % 36 72 717
30 % 36 72 719
Entity #16 | Chains: N
RIBOSOMAL PROTEIN L21E protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 420
95 % 36 68 612
90 % 36 68 645
70 % 36 68 686
50 % 36 70 707
40 % 36 70 748
30 % 36 71 735
Entity #17 | Chains: O
RIBOSOMAL PROTEIN L22 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 67 431
95 % 36 68 603
90 % 36 68 638
70 % 36 68 678
50 % 36 68 731
40 % 36 68 765
30 % 36 162 241
Entity #18 | Chains: P
RIBOSOMAL PROTEIN L23 protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 351
95 % 36 74 514
90 % 36 74 551
70 % 36 74 589
50 % 36 76 636
40 % 36 78 657
30 % 43 388 57
Entity #19 | Chains: Q
RIBOSOMAL PROTEIN L24 protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 349
95 % 36 74 512
90 % 36 74 548
70 % 36 74 588
50 % 36 167 203
40 % 36 167 224
30 % 36 167 232
Entity #2 | Chains: 9
5S RRNA rna, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #20 | Chains: R
RIBOSOMAL PROTEIN L24E protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 70 397
95 % 34 70 579
90 % 34 70 617
70 % 34 70 654
50 % 34 70 708
40 % 34 70 750
30 % 34 70 753
Entity #21 | Chains: S
RIBOSOMAL PROTEIN L29 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 352
95 % 36 74 515
90 % 36 74 552
70 % 36 74 590
50 % 36 74 659
40 % 36 74 703
30 % 36 74 702
Entity #22 | Chains: T
RIBOSOMAL PROTEIN L30 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 412
95 % 36 68 604
90 % 36 68 639
70 % 36 68 679
50 % 36 68 732
40 % 36 70 742
30 % 36 71 733
Entity #23 | Chains: U
RIBOSOMAL PROTEIN L31E protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 422
95 % 36 68 614
90 % 36 68 647
70 % 36 68 688
50 % 36 68 738
40 % 36 68 769
30 % 36 68 773
Entity #24 | Chains: V
RIBOSOMAL PROTEIN L32E protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60177
95 % 3 5 13444
90 % 3 5 13198
70 % 3 5 12404
50 % 3 5 11089
40 % 3 5 10075
30 % 3 5 8755
Entity #25 | Chains: W
RIBOSOMAL PROTEIN L37AE protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66369
95 % 1 1 46000
90 % 1 1 43778
70 % 3 21 2737
50 % 7 30 1830
40 % 7 116 322
30 % 26 139 281
Entity #26 | Chains: X
RIBOSOMAL PROTEIN L37E protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 423
95 % 36 68 615
90 % 36 68 648
70 % 36 68 691
50 % 36 69 719
40 % 36 69 758
30 % 36 69 764
Entity #27 | Chains: Y
RIBOSOMAL PROTEIN L39E protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67745
95 % 36 68 616
90 % 36 68 649
70 % 36 68 692
50 % 36 160 213
40 % 36 160 235
30 % 36 160 247
Entity #28 | Chains: Z
RIBOSOMAL PROTEIN L44E protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 421
95 % 36 68 613
90 % 36 68 646
70 % 36 68 687
50 % 36 68 737
40 % 36 68 768
30 % 36 156 253
Entity #29 | Chains: 1
RIBOSOMAL PROTEIN L6 protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 68 411
95 % 36 68 602
90 % 36 68 637
70 % 36 68 677
50 % 36 68 730
40 % 36 161 230
30 % 44 473 36
Entity #3 | Chains: A
RIBOSOMAL PROTEIN L2 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2063
95 % 36 68 598
90 % 36 68 635
70 % 36 68 674
50 % 36 158 214
40 % 36 160 233
30 % 36 160 245
Entity #4 | Chains: B
RIBOSOMAL PROTEIN L3 protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50316
95 % 36 74 501
90 % 36 74 533
70 % 36 74 569
50 % 36 74 647
40 % 36 167 222
30 % 36 167 230
Entity #5 | Chains: C
RIBOSOMAL PROTEIN L4 protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9480
95 % 36 74 504
90 % 36 74 535
70 % 36 74 575
50 % 36 74 650
40 % 36 76 677
30 % 36 77 675
Entity #6 | Chains: D
RIBOSOMAL PROTEIN L5 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 343
95 % 36 74 507
90 % 36 74 540
70 % 36 74 578
50 % 36 74 652
40 % 37 167 223
30 % 37 167 231
Entity #7 | Chains: E
RIBOSOMAL PROTEIN L7AE protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 21 2091
95 % 3 21 2709
90 % 36 68 642
70 % 36 68 682
50 % 51 104 303
40 % 58 118 276
30 % 58 120 284
Entity #8 | Chains: F
RIBOSOMAL PROTEIN L10E protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59113
95 % 1 1 40895
90 % 1 7 9594
70 % 3 27 2023
50 % 36 74 653
40 % 36 79 645
30 % 36 79 660
Entity #9 | Chains: G
RIBOSOMAL PROTEIN L13 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 74 345
95 % 36 74 509
90 % 36 74 545
70 % 36 74 584
50 % 36 74 657
40 % 37 77 667
30 % 37 78 667

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4V9F 13 K 50S ribosomal protein L14P 2238
2 1VQO 13 K 50S ribosomal protein L14P 2238
3 1VQ8 13 K 50S ribosomal protein L14P 2238
4 1S72 13 K 50S ribosomal protein L14P 2238
5 1JJ2 12 J RIBOSOMAL PROTEIN L14 2238
6 1YHQ 13 K 50S ribosomal protein L14P 2238
7 1VQP 13 K 50S ribosomal protein L14P 2238
8 1VQM 13 K 50S ribosomal protein L14P 2238
9 3CC2 11 K 50S ribosomal protein L14P 2238
10 1VQL 13 K 50S ribosomal protein L14P 2238
11 1VQK 13 K 50S ribosomal protein L14P 2238
12 1VQN 14 K 50S ribosomal protein L14P 2238
13 1YIJ 13 K 50S ribosomal protein L14P 2238
14 1YI2 13 K 50S ribosomal protein L14P 2238
15 1VQ9 13 K 50S ribosomal protein L14P 2238
16 1VQ7 13 K 50S ribosomal protein L14P 2238
17 3CCM 11 K 50S ribosomal protein L14P 2238
18 1VQ5 13 K 50S ribosomal protein L14P 2238
19 3CCJ 11 K 50S ribosomal protein L14P 2238
20 3CC7 11 K 50S ribosomal protein L14P 2238
21 1YIT 17 K 50S RIBOSOMAL PROTEIN L14P 2238
22 3CCE 11 K 50S ribosomal protein L14P 2238
23 3G6E 12 K 50S ribosomal protein L14P 2238
24 3CPW 12 J 50S ribosomal protein L14P 2238
25 3CCU 11 K 50S ribosomal protein L14P 2238
26 1VQ6 14 K 50S ribosomal protein L14P 2238
27 1M90 13 L RIBOSOMAL PROTEIN L14 2238
28 3CCL 11 K 50S ribosomal protein L14P 2238
29 1YJW 17 K 50S RIBOSOMAL PROTEIN L14P 2238
30 1YJ9 13 K 50S ribosomal protein L14P 2238
31 3CD6 11 K 50S ribosomal protein L14P 2238
32 3CCV 11 K 50S ribosomal protein L14P 2238
33 3CC4 11 K 50S ribosomal protein L14P 2238
34 2OTL 12 K 50S ribosomal protein L14P 2238
35 3G71 12 K 50S ribosomal protein L14P 2238
36 1FFK 10 H RIBOSOMAL PROTEIN L14 2238
37 1VQ4 13 K 50S ribosomal protein L14P 2238
38 1YJN 13 K 50S ribosomal protein L14P 2238
39 3CMA 11 K 50S ribosomal protein L14P 2238
40 3CCS 11 K 50S ribosomal protein L14P 2238
41 3CCQ 11 K 50S ribosomal protein L14P 2238
42 3I56 11 K 50S ribosomal protein L14P 2238
43 3CCR 11 K 50S ribosomal protein L14P 2238
44 2OTJ 12 K 50S ribosomal protein L14P 2238
45 1KQS 14 J RIBOSOMAL PROTEIN L14 2238
46 3OW2 12 J 50S ribosomal protein L14P 2238
47 3CXC 13 J RIBOSOMAL PROTEIN L14 2238
48 1QVG 13 J 50S ribosomal protein L14P 2238
49 3CME 11 K 50S ribosomal protein L14P 2238
50 2QEX 12 K 50S ribosomal protein L14P 2238
51 1KC8 12 L RIBOSOMAL PROTEIN L14 2238
52 1N8R 12 L 50S ribosomal protein L14P 2238
53 1Q81 13 L 50S ribosomal protein L14P 2238
54 1Q82 13 L 50S ribosomal protein L14P 2238
55 1QVF 13 J 50S ribosomal protein L14P 2238
56 1NJI 12 L 50S ribosomal protein L14P 2238
57 1K73 12 L RIBOSOMAL PROTEIN L14 2238
58 1K9M 12 L RIBOSOMAL PROTEIN L14 2238
59 1KD1 12 L RIBOSOMAL PROTEIN L14 2238
60 3I55 12 K 50S ribosomal protein L14P 2238
61 1K8A 12 L RIBOSOMAL PROTEIN L14 2238
62 1Q86 13 L 50S ribosomal protein L14P 2238
63 1M1K 12 L RIBOSOMAL PROTEIN L14 2238
64 3G4S 12 K 50S ribosomal protein L14P 2238
65 1W2B 15 J 50S RIBOSOMAL PROTEIN L14P 2238
66 2QA4 13 K 50S ribosomal protein L14P 2238
67 1Q7Y 13 L 50S ribosomal protein L14P 2238
68 4ADX 21 K RPL14 145262