Sequence Similarity Clusters for the Entities in PDB 1FFF

Entity #1 | Chains: C,D
PROTEASE RETROPEPSIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 6935
95 % 424 587 2 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 458 649 3
70 % 477 676 5
50 % 485 702 5
40 % 495 712 9
30 % 497 714 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures