Sequence Similarity Clusters for the Entities in PDB 1FEU

Entity #1 | Chains: B,E
19 NT FRAGMENT OF 5S RRNA rna, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C,F
21 NT FRAGMENT OF 5S RRNA rna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A,D
50S RIBOSOMAL PROTEIN L25 protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42309
95 % 1 161 93 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 2.3
PDBFlex
90 % 1 161 98
70 % 1 161 114
50 % 1 161 154
40 % 1 161 168
30 % 1 171 170

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures