Sequence Similarity Clusters for the Entities in PDB 1FE1

Entity #1 | Chains: A,J
PROTEIN (PHOTOSYSTEM II: SUBUNIT PSBA) protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B,K
PROTEIN (PHOTOSYSTEM II: SUBUNIT PSBD) protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C,L
PROTEIN (PHOTOSYSTEM II: SUBUNIT PSBC) protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D,M
PROTEIN (PHOTOSYSTEM II: SUBUNIT PSBB) protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #5 | Chains: E,N
PROTEIN (PHOTOSYSTEM II: SUBUNIT PSBE) protein, length: 40 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #6 | Chains: F,O
PROTEIN (PHOTOSYSTEM II: SUBUNIT PSBF) protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #7 | Chains: G,P
PROTEIN (PHOTOSYSTEM II: SUBUNIT UNKNOWN) protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #8 | Chains: H,Q
PROTEIN (PHOTOSYSTEM II: SUBUNIT PSBO) protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #9 | Chains: I,R
PROTEIN (PHOTOSYSTEM II: SUBUNIT PSBV) protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures