Sequence Similarity Clusters for the Entities in PDB 1FDY

Entity #1 | Chains: A,B,C,D
N-ACETYLNEURAMINATE LYASE protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 8803
95 % 22 24 471 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 0.6
PDBFlex
90 % 22 24 508
70 % 22 24 548
50 % 22 24 578
40 % 22 24 616
30 % 145 157 105

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures