Sequence Similarity Clusters for the Entities in PDB 1FDQ

Entity #1 | Chains: A,B
FATTY ACID-BINDING PROTEIN, BRAIN protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 9557
95 % 2 4 9695 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 2 4 9583
70 % 2 4 9147
50 % 60 99 333
40 % 141 210 146
30 % 463 742 21

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.