Sequence Similarity Clusters for the Entities in PDB 1FDQ

Entity #1 | Chains: A,B
FATTY ACID-BINDING PROTEIN, BRAIN protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 22281
95 % 1 3 19133 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 3 18622
70 % 1 3 17222
50 % 55 93 367
40 % 135 201 153
30 % 451 727 21

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.