Sequence Similarity Clusters for the Entities in PDB 1FDP

Entity #1 | Chains: A,B,C,D
PROENZYME OF COMPLEMENT FACTOR D protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 19 1061
95 % 18 26 1056 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 1.1
PDBFlex
90 % 18 26 1076
70 % 18 26 1115
50 % 19 27 1081
40 % 1224 1696 4
30 % 1317 1846 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.