Sequence Similarity Clusters for the Entities in PDB 1FDO

Entity #1 | Chains: A
FORMATE DEHYDROGENASE H protein, length: 715 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 24132
95 % 3 4 21416 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 3 4 20783
70 % 3 4 19047
50 % 3 4 16473
40 % 3 4 14593
30 % 14 16 2370

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures