Sequence Similarity Clusters for the Entities in PDB 1FDL

Entity #1 | Chains: L
IGG1-KAPPA D1.3 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53325
95 % 11 25 994
90 % 16 36 648
70 % 701 1583 3
50 % 1720 3846 1
40 % 1721 3847 1
30 % 1938 4574 1
Entity #2 | Chains: H
IGG1-KAPPA D1.3 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 35292
95 % 2 2 27021
90 % 5 9 6672
70 % 840 1866 1
50 % 1721 3846 1
40 % 1722 3847 1
30 % 1939 4574 1
Entity #3 | Chains: Y
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 506 574 3
95 % 557 627 4
90 % 569 644 5
70 % 776 859 6
50 % 782 868 6
40 % 811 902 10
30 % 811 902 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.