POP-OUT | CLOSE

An Information Portal to 111749 Biological Macromolecular Structures

CRYSTALLOGRAPHIC REFINEMENT OF THE THREE-DIMENSIONAL STRUCTURE OF THE FAB D1.3-LYSOZYME COMPLEX AT 2.5-ANGSTROMS RESOLUTION
Sequence Clustering and Redundancy Reduction Results
1FDL
Sequence Clusters for the Sequence Entities in PDB 1FDL
Entity #1: Chains: L - IGG1-KAPPA D1.3 FAB (LIGHT CHAIN) protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 49859
95% 11 24 971
90% 16 35 625
70% 639 1454 3
50% 1550 3477 1
40% 1551 3478 1
30% 1722 4103 1
Entity #2: Chains: H - IGG1-KAPPA D1.3 FAB (HEAVY CHAIN) protein, length: 218 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 32883
95% 2 2 25250
90% 5 10 5658
70% 756 1682 1
50% 1551 3477 1
40% 1552 3478 1
30% 1723 4103 1
Entity #3: Chains: Y - HEN EGG WHITE LYSOZYME protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 478 546 3
95% 529 599 4
90% 541 616 5
70% 748 831 6
50% 754 840 6
40% 783 874 10
30% 783 874 16
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.