Sequence Similarity Clusters for the Entities in PDB 1FDL

Entity #1 | Chains: L
IGG1-KAPPA D1.3 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54451
95 % 11 25 1016
90 % 16 36 698
70 % 727 1639 3
50 % 1783 3985 1
40 % 1784 3986 1
30 % 2002 4715 1
Entity #2 | Chains: H
IGG1-KAPPA D1.3 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 36063
95 % 2 2 27582
90 % 5 9 6833
70 % 869 1932 1
50 % 1784 3985 1
40 % 1785 3986 1
30 % 2003 4715 1
Entity #3 | Chains: Y
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 514 583 3
95 % 565 636 4
90 % 577 653 5
70 % 784 868 6
50 % 790 877 6
40 % 819 911 10
30 % 819 911 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.