Sequence Similarity Clusters for the Entities in PDB 1FDL

Entity #1 | Chains: L
IGG1-KAPPA D1.3 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53615
95 % 11 25 998
90 % 16 36 686
70 % 715 1609 3
50 % 1750 3902 1
40 % 1751 3903 1
30 % 1968 4631 1
Entity #2 | Chains: H
IGG1-KAPPA D1.3 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 35504
95 % 2 2 27174
90 % 5 9 6707
70 % 855 1894 1
50 % 1751 3902 1
40 % 1752 3903 1
30 % 1969 4631 1
Entity #3 | Chains: Y
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 509 577 3
95 % 560 630 4
90 % 572 647 5
70 % 779 862 6
50 % 785 871 6
40 % 814 905 10
30 % 814 905 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.