POP-OUT | CLOSE

An Information Portal to 110071 Biological Macromolecular Structures

CRYSTALLOGRAPHIC REFINEMENT OF THE THREE-DIMENSIONAL STRUCTURE OF THE FAB D1.3-LYSOZYME COMPLEX AT 2.5-ANGSTROMS RESOLUTION
Sequence Clustering and Redundancy Reduction Results
1FDL
Sequence Clusters for the Sequence Entities in PDB 1FDL
Entity #1: Chains: L - IGG1-KAPPA D1.3 FAB (LIGHT CHAIN) protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 49044
95% 11 24 953
90% 16 35 615
70% 624 1412 3
50% 1504 3355 1
40% 1505 3356 1
30% 1674 3971 1
Entity #2: Chains: H - IGG1-KAPPA D1.3 FAB (HEAVY CHAIN) protein, length: 218 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 32259
95% 2 2 24789
90% 5 10 5546
70% 733 1622 2
50% 1505 3355 1
40% 1506 3356 1
30% 1675 3971 1
Entity #3: Chains: Y - HEN EGG WHITE LYSOZYME protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 468 534 3
95% 519 587 4
90% 531 604 5
70% 738 819 6
50% 744 828 6
40% 773 862 10
30% 773 862 16
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.