Sequence Similarity Clusters for the Entities in PDB 1FDL

Entity #1 | Chains: L
IGG1-KAPPA D1.3 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55882
95 % 11 26 930
90 % 16 37 670
70 % 766 1710 2
50 % 1881 4166 1
40 % 1881 4167 1
30 % 2103 4915 1
Entity #2 | Chains: H
IGG1-KAPPA D1.3 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 37082
95 % 2 2 28347
90 % 5 9 7041
70 % 913 2016 1
50 % 1882 4166 1
40 % 1882 4167 1
30 % 2104 4915 1
Entity #3 | Chains: Y
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 543 613 3
95 % 594 666 4
90 % 606 683 5
70 % 813 899 6
50 % 819 907 6
40 % 848 941 10
30 % 848 941 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.