POP-OUT | CLOSE

An Information Portal to 105212 Biological Macromolecular Structures

CRYSTALLOGRAPHIC REFINEMENT OF THE THREE-DIMENSIONAL STRUCTURE OF THE FAB D1.3-LYSOZYME COMPLEX AT 2.5-ANGSTROMS RESOLUTION
Sequence Clustering and Redundancy Reduction Results
1FDL
Sequence Clusters for the Sequence Entities in PDB 1FDL
Entity #1: Chains: L - IGG1-KAPPA D1.3 FAB (LIGHT CHAIN) protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 46520
95% 11 22 1047
90% 15 31 775
70% 586 1303 3
50% 1409 3106 1
40% 1410 3107 1
30% 1573 3679 1
Entity #2: Chains: H - IGG1-KAPPA D1.3 FAB (HEAVY CHAIN) protein, length: 218 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 30539
95% 2 2 23560
90% 5 10 5235
70% 686 1498 2
50% 1410 3106 1
40% 1411 3107 1
30% 1574 3679 1
Entity #3: Chains: Y - HEN EGG WHITE LYSOZYME protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 423 486 3
95% 470 535 4
90% 482 552 4
70% 689 767 6
50% 695 776 6
40% 724 810 9
30% 724 810 14
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.