Sequence Similarity Clusters for the Entities in PDB 1FDL

Entity #1 | Chains: L
IGG1-KAPPA D1.3 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54876
95 % 11 25 1031
90 % 16 36 714
70 % 732 1648 3
50 % 1800 4012 1
40 % 1801 4014 1
30 % 2021 4750 1
Entity #2 | Chains: H
IGG1-KAPPA D1.3 FAB (HEAVY CHAIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 36362
95 % 2 2 27802
90 % 5 9 6878
70 % 877 1945 1
50 % 1801 4012 1
40 % 1802 4014 1
30 % 2022 4750 1
Entity #3 | Chains: Y
HEN EGG WHITE LYSOZYME protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 533 603 3
95 % 584 656 4
90 % 596 673 5
70 % 803 888 6
50 % 809 896 6
40 % 838 930 10
30 % 838 930 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.