Sequence Similarity Clusters for the Entities in PDB 1FDK

Entity #1 | Chains: A
PHOSPHOLIPASE A2 protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 11 5814
95 % 19 32 1665 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 19 32 1701
70 % 25 63 681
50 % 43 122 299
40 % 112 296 100
30 % 112 296 113

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.