Sequence Similarity Clusters for the Entities in PDB 1FDH

Entity #1 | Chains: A,B
HEMOGLOBIN F (DEOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 211 211 25
95 % 242 242 32
90 % 243 243 33
70 % 323 324 16
50 % 735 738 4
40 % 740 743 7
30 % 1182 1186 8
Entity #2 | Chains: G,H
HEMOGLOBIN F (DEOXY) (GAMMA CHAIN) protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 13321
95 % 5 5 4769
90 % 5 5 4784
70 % 337 338 13
50 % 736 738 4
40 % 741 743 7
30 % 1183 1186 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.