Sequence Similarity Clusters for the Entities in PDB 1FDH

Entity #1 | Chains: A,B
HEMOGLOBIN F (DEOXY) (ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 202 202 29
95 % 233 233 30
90 % 234 234 31
70 % 313 314 17
50 % 709 712 4
40 % 714 717 8
30 % 1151 1155 7
Entity #2 | Chains: G,H
HEMOGLOBIN F (DEOXY) (GAMMA CHAIN) protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 12497
95 % 5 5 4451
90 % 5 5 4467
70 % 327 328 11
50 % 710 712 4
40 % 715 717 8
30 % 1152 1155 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.