Sequence Similarity Clusters for the Entities in PDB 1FDF

Entity #1 | Chains: A
RHODOPSIN protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75172
95 % 1 1 52492
90 % 1 1 49778
70 % 1 1 43563
50 % 1 1 37177
40 % 1 1 32796
30 % 1 1 27848

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures