Sequence Similarity Clusters for the Entities in PDB 1FD7

Entity #1 | Chains: D,E,F,G,H,L,M,N,O,P
HEAT-LABILE ENTEROTOXIN B CHAIN protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 19 218
95 % 6 22 256 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 26 55 78
70 % 27 58 86
50 % 27 58 118
40 % 27 58 141
30 % 27 58 146

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5ELB 1 A, B, C, D, E, F, G, H, I, J Cholera enterotoxin B subunit 666
2 5LZG 1 A, B, C, D, E Cholera enterotoxin subunit B 666
3 5LZH 1 A, B, D Cholera enterotoxin B subunit 666
4 5LZH 2 C, E Cholera enterotoxin B subunit 666
5 3CHB 1 D, E, F, G, H CHOLERA TOXIN RECEPTOR BINDING SITE ON EACH MONOMER OCCUPIED BY GM1 PENTASACCHARIDE B-PENTAMER 666
6 1JR0 1 D, E, F, G, H cholera toxin B subunit 666
7 5LZJ 1 A, B, C, D, E Cholera enterotoxin subunit B 666
8 1DJR 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN B PENTAMER 562
9 1RDP 1 D, E, F, G, H cholera toxin B protein (CTB) 666
10 1PZK 1 D, E, F, G, H Cholera Toxin B Subunit 666
11 1RF2 1 D, E, F, G, H cholera toxin B protein (CTB) 666
12 1PZJ 1 D, E, F, G, H Cholera Toxin B Subunit 666
13 1MD2 1 D, E, F, G, H CHOLERA TOXIN B SUBUNIT 666
14 1RD9 1 D, E, F, G, H cholera toxin B protein (CTB) 666
15 5ELD 1 A, B, C, D, E Cholera enterotoxin B subunit 666
16 1LLR 1 D, E, F, G, H CHOLERA TOXIN B SUBUNIT 666
17 5LZI 1 A, B, C, D, E Heat-labile enterotoxin B chain 562
18 5ELF 1 A, B, C, D, E, F, G, H, I, J Cholera enterotoxin subunit B 666
19 1RCV 1 D, E, F, G, H cholera toxin B protein (CTB) 666
20 5ELC 1 A, B, C, D, E, F, G, H, I, J Cholera enterotoxin subunit B 666
21 5ELE 1 A, B, C, D, E, F, G, H, I, J Cholera enterotoxin subunit B 666
22 1EFI 1 D, E, F, G, H PROTEIN (HEAT-LABILE ENTEROTOXIN B CHAIN) 562
23 1LT5 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN B-PENTAMER 562
24 1S5D 2 D, E, F, G, H cholera toxin B protein (CTB) 666
25 1EEF 1 D, E, F, G, H, L, M, N, O, P PROTEIN (HEAT-LABILE ENTEROTOXIN B CHAIN) 562
26 1FD7 1 D, E, F, G, H, L, M, N, O, P HEAT-LABILE ENTEROTOXIN B CHAIN 562
27 1S5E 2 D, E, F, G, H, J, K, L, M, N cholera toxin B protein (CTB) 666
28 2XRS 1 D, E, F, G, H, L, M, N, O, P HEAT-LABILE ENTEROTOXIN B CHAIN PORCINE ENTEROTOXIN PLT B SUBUNIT CONTAINS LINEAR NEOLACTOTETRAOSE GAL BETA4 GLCNAC BETA3 GAL BETA4 562
29 1PZI 1 D, E, F, G, H Heat-labile Enterotoxin B subunit 562
30 3EFX 1 D, E, F, G, H, I, J, K, L, M Cholera enterotoxin subunit B, Heat-labile enterotoxin B chain 666
31 1LTS 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN, SUBUNIT B 562
32 2CHB 1 D, E, F, G, H CHOLERA TOXIN RECEPTOR BINDING SITE ON EACH MONOMER OCCUPIED BY GM1 PENTASACCHARIDE B-PENTAMER 666
33 1CHP 1 D, E, F, G, H CHOLERA TOXIN B PENTAMER 666
34 1G8Z 1 D, E, F, G, H CHOLERA TOXIN B PROTEIN 666
35 1LT3 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN LACTOSE BOUND HOLOTOXIN 562
36 1LT4 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN LACTOSE HOLOTOXIN 562
37 1EEI 1 D, E, F, G, H PROTEIN (CHOLERA TOXIN B) RECEPTOR BINDING SITE ON EACH MONOMER OCCUPIED BY METANITROPHENYL-ALPHA-D-GALACTOSIDE 666
38 1S5B 2 D, E, F, G, H cholera toxin B protein (CTB) 666
39 1LTI 1 D, E, F, G, H HEAT LABILE ENTEROTOXIN TYPE I LATENT/INACTIVE FORM 562
40 1LTA 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN, SUBUNIT B 562
41 1LT6 1 D, E, F, G, H, L, M, N, O, P HEAT-LABILE ENTEROTOXIN B-PENTAMER 562
42 1CHQ 1 D, E, F, G, H CHOLERA TOXIN B PENTAMER 666
43 1JQY 1 D, E, F, G, H, L, M, N, O, P, V, W, X, Y, Z HEAT-LABILE ENTEROTOXIN B CHAIN 562
44 1CT1 1 D, E, F, G, H CHOLERA TOXIN B-PENTAMER 666
45 1LTT 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN, SUBUNIT B 562
46 1FGB 1 D, E, F, G, H CHOLERA TOXIN B SUBUNIT PENTAMER 666
47 1LTG 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN 562
48 1XTC 3 D, E, F, G, H CHOLERA TOXIN 666
49 1LTB 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN, SUBUNIT B 562
50 2O2L 1 D, E, F, G, H, I, J, K, L, M Heat-labile enterotoxin B chain 562
51 2XRQ 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN B CHAIN PORCINE ENTEROTOXIN PLT B-SUBUNIT CONTAINING GM1 PENTASACCHARIDE(GAL-BETA3-GALNAC-BETA4 (NEUAC ALPHA3)-GAL-BETA4 -GLC RESIDUES 22-124 562
52 1S5C 2 D, E, F, G, H cholera enterotoxin B-subunit 666
53 1HTL 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN, SUBUNIT B 562
54 1S5F 2 D, E, F, G, H cholera toxin B protein (CTB) 666
55 1LTR 1 D, E, F, G, H HEAT-LABILE ENTEROTOXIN THE B SUBUNIT HAS A PEPTIDE WITH ANTI-HSV ACTIVITY AS AN EXTENSION, RESIDUES 104-113 SUBUNIT B-R2 562