Sequence Similarity Clusters for the Entities in PDB 1FD3

Entity #1 | Chains: A,B,C,D
BETA-DEFENSIN 2 protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 2590
95 % 1 4 2915
90 % 1 4 2976
70 % 1 4 2933
50 % 1 7 2505
40 % 1 7 2453
30 % 1 7 2295

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1FD3 1 A, B, C, D BETA-DEFENSIN 2 9606
2 1FD4 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P BETA-DEFENSIN 2 9606
3 1FQQ 1 A BETA-DEFENSIN-2 9606
4 1E4Q 1 A BETA-DEFENSIN 2 RESIDUES 28-64 OF THE BETA-DEFENSIN 2 PRECURSOR 9606