Sequence Similarity Clusters for the Entities in PDB 1FD3

Entity #1 | Chains: A,B,C,D
BETA-DEFENSIN 2 protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 2359
95 % 1 5 2659
90 % 1 5 2726
70 % 1 5 2713
50 % 1 8 2410
40 % 1 8 2374
30 % 1 8 2224

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1FD3 1 A, B, C, D BETA-DEFENSIN 2 9606
2 1FD4 1 A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P BETA-DEFENSIN 2 9606
3 6CS9 1 A, B Beta-defensin 4A 9606
4 1FQQ 1 A BETA-DEFENSIN-2 9606
5 1E4Q 1 A BETA-DEFENSIN 2 RESIDUES 28-64 OF THE BETA-DEFENSIN 2 PRECURSOR 9606