Sequence Similarity Clusters for the Entities in PDB 1FD3

Entity #1 | Chains: A,B,C,D
BETA-DEFENSIN 2 protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 2331
95 % 1 4 2990
90 % 1 4 3029
70 % 1 4 2992
50 % 1 4 2945
40 % 1 7 2485
30 % 1 7 2368

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures