Sequence Similarity Clusters for the Entities in PDB 1FCD

Entity #1 | Chains: A,B
FLAVOCYTOCHROME C SULFIDE DEHYDROGENASE (FLAVIN-BINDING SUBUNIT) protein, length: 401 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34750
95 % 1 1 27822 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 26857
70 % 2 2 20070
50 % 3 3 13456
40 % 3 3 12144
30 % 3 3 10536
Entity #2 | Chains: C,D
FLAVOCYTOCHROME C SULFIDE DEHYDROGENASE (CYTOCHROME SUBUNIT) protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44320
95 % 1 1 33486
90 % 1 1 31979
70 % 2 2 21444
50 % 2 2 18532
40 % 2 2 16506
30 % 2 2 14110

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures