Sequence Similarity Clusters for the Entities in PDB 1FCD

Entity #1 | Chains: A,B
FLAVOCYTOCHROME C SULFIDE DEHYDROGENASE (FLAVIN-BINDING SUBUNIT) protein, length: 401 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36445
95 % 1 1 31049 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 29755
70 % 2 2 21016
50 % 3 3 14483
40 % 3 3 12907
30 % 3 3 10870
Entity #2 | Chains: C,D
FLAVOCYTOCHROME C SULFIDE DEHYDROGENASE (CYTOCHROME SUBUNIT) protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36444
95 % 1 1 31048 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 29754
70 % 2 2 21015
50 % 2 2 18076
40 % 2 2 15982
30 % 2 2 13390

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures