Sequence Similarity Clusters for the Entities in PDB 1FCD

Entity #1 | Chains: A,B
FLAVOCYTOCHROME C SULFIDE DEHYDROGENASE (FLAVIN-BINDING SUBUNIT) protein, length: 401 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34335
95 % 1 1 27497 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 26549
70 % 2 2 19830
50 % 2 2 17209
40 % 2 2 15363
30 % 2 2 13179
Entity #2 | Chains: C,D
FLAVOCYTOCHROME C SULFIDE DEHYDROGENASE (CYTOCHROME SUBUNIT) protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43794
95 % 1 1 33103
90 % 1 1 31628
70 % 2 2 21203
50 % 2 2 18339
40 % 2 2 16338
30 % 2 2 13964

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures