Sequence Similarity Clusters for the Entities in PDB 1FCC

Entity #1 | Chains: A,B
IGG1 MO61 FC protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 21 1032
95 % 157 168 115 Flexibility: Low
Max RMSD: 9.9, Avg RMSD: 1.5
PDBFlex
90 % 165 177 116
70 % 166 178 129
50 % 177 189 143
40 % 177 189 158
30 % 6850 7588 1
Entity #2 | Chains: C,D
STREPTOCOCCAL PROTEIN G (C2 FRAGMENT) protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27445
95 % 2 2 24189 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 33 67 357
70 % 40 74 354
50 % 40 84 405
40 % 46 90 407
30 % 46 90 407

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures