Sequence Similarity Clusters for the Entities in PDB 1FCC

Entity #1 | Chains: A,B
IGG1 MO61 FC protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 14 1240
95 % 150 160 90 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 1.4
PDBFlex
90 % 158 169 86
70 % 159 170 102
50 % 168 179 136
40 % 168 179 150
30 % 5174 5567 1
Entity #2 | Chains: C,D
STREPTOCOCCAL PROTEIN G (C2 FRAGMENT) protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48769
95 % 17 34 667 Flexibility: Medium
Max RMSD: 13.0, Avg RMSD: 4.2
PDBFlex
90 % 32 66 330
70 % 38 72 335
50 % 38 82 352
40 % 38 82 376
30 % 44 88 345

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.