Sequence Similarity Clusters for the Entities in PDB 1FAX

Entity #1 | Chains: A
FACTOR XA protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60019
95 % 130 134 263 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 130 134 277
70 % 131 135 320
50 % 687 708 14
40 % 1767 1863 4
30 % 1783 1885 6
Entity #2 | Chains: L
FACTOR XA protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 72237
95 % 24 26 1765 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 1.2
PDBFlex
90 % 24 26 1805
70 % 24 26 1816
50 % 24 26 1852
40 % 27 31 1522
30 % 27 31 1501

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures