Sequence Similarity Clusters for the Entities in PDB 1FAW

Entity #1 | Chains: A,C
HEMOGLOBIN (ALPHA SUBUNIT) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44832
95 % 5 5 7982 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 8 11 2918
70 % 270 327 15
50 % 633 744 4
40 % 638 749 8
30 % 1076 1201 8
Entity #2 | Chains: B,D
HEMOGLOBIN (BETA SUBUNIT) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44482
95 % 10 12 2365 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 12 17 1668
70 % 288 341 13
50 % 634 744 4
40 % 639 749 8
30 % 1077 1201 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures