Sequence Similarity Clusters for the Entities in PDB 1FAW

Entity #1 | Chains: A,C
HEMOGLOBIN (ALPHA SUBUNIT) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46164
95 % 5 5 8249 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 8 11 3006
70 % 275 332 16
50 % 643 754 4
40 % 648 759 8
30 % 1101 1226 8
Entity #2 | Chains: B,D
HEMOGLOBIN (BETA SUBUNIT) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45807
95 % 10 12 2459 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 12 17 1740
70 % 293 346 14
50 % 644 754 4
40 % 649 759 8
30 % 1102 1226 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures