Sequence Similarity Clusters for the Entities in PDB 1FAW

Entity #1 | Chains: A,C
HEMOGLOBIN (ALPHA SUBUNIT) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45501
95 % 5 5 8097 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 8 11 2960
70 % 275 332 15
50 % 643 754 4
40 % 648 759 8
30 % 1093 1218 8
Entity #2 | Chains: B,D
HEMOGLOBIN (BETA SUBUNIT) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45144
95 % 10 12 2411 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 12 17 1707
70 % 293 346 12
50 % 644 754 4
40 % 649 759 8
30 % 1094 1218 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures