Sequence Similarity Clusters for the Entities in PDB 1FAW

Entity #1 | Chains: A,C
HEMOGLOBIN (ALPHA SUBUNIT) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43614
95 % 5 5 7760 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 8 11 2828
70 % 268 322 17
50 % 629 734 5
40 % 634 739 8
30 % 1063 1182 8
Entity #2 | Chains: B,D
HEMOGLOBIN (BETA SUBUNIT) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43274
95 % 10 12 2300 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 12 17 1622
70 % 286 336 13
50 % 630 734 5
40 % 635 739 8
30 % 1064 1182 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.