Sequence Similarity Clusters for the Entities in PDB 1FAV

Entity #1 | Chains: A
HIV-1 ENVELOPE PROTEIN CHIMERA protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70480
95 % 1 1 48825
90 % 1 1 46348
70 % 1 1 40711
50 % 1 2 15868
40 % 1 2 14163
30 % 1 2 12110
Entity #2 | Chains: C
PROTEIN (TRANSMEMBRANE GLYCOPROTEIN) protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73263
95 % 1 1 51086
90 % 1 1 48498
70 % 1 1 42539
50 % 1 1 36311
40 % 1 1 32003
30 % 1 1 27115

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.