Sequence Similarity Clusters for the Entities in PDB 1FAV

Entity #1 | Chains: A
HIV-1 ENVELOPE PROTEIN CHIMERA protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65020
95 % 1 1 45018
90 % 1 1 42870
70 % 1 1 37877
50 % 1 2 14621
40 % 1 2 13078
30 % 1 2 11212
Entity #2 | Chains: C
PROTEIN (TRANSMEMBRANE GLYCOPROTEIN) protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67658
95 % 1 1 47166
90 % 1 1 44907
70 % 1 1 39612
50 % 1 1 33935
40 % 1 1 29929
30 % 1 1 25352

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.