Sequence Similarity Clusters for the Entities in PDB 1FAV

Entity #1 | Chains: A
HIV-1 ENVELOPE PROTEIN CHIMERA protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71411
95 % 1 1 49477
90 % 1 1 46944
70 % 1 1 41161
50 % 1 2 16050
40 % 1 2 14323
30 % 1 2 12254
Entity #2 | Chains: C
PROTEIN (TRANSMEMBRANE GLYCOPROTEIN) protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74223
95 % 1 1 51761
90 % 1 1 49117
70 % 1 1 43007
50 % 1 1 36680
40 % 1 1 32332
30 % 1 1 27406

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.