Sequence Similarity Clusters for the Entities in PDB 1FAV

Entity #1 | Chains: A
HIV-1 ENVELOPE PROTEIN CHIMERA protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61523
95 % 1 1 42660
90 % 1 1 40680
70 % 1 1 36057
50 % 1 2 13842
40 % 1 2 12404
30 % 1 2 10656
Entity #2 | Chains: C
PROTEIN (TRANSMEMBRANE GLYCOPROTEIN) protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64075
95 % 1 1 44741
90 % 1 1 42654
70 % 1 1 37744
50 % 1 1 32379
40 % 1 1 28611
30 % 1 1 24249

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.