Sequence Similarity Clusters for the Entities in PDB 1FAV

Entity #1 | Chains: A
HIV-1 ENVELOPE PROTEIN CHIMERA protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66638
95 % 1 1 46097
90 % 1 1 43856
70 % 1 1 38683
50 % 1 2 15028
40 % 1 2 13422
30 % 1 2 11494
Entity #2 | Chains: C
PROTEIN (TRANSMEMBRANE GLYCOPROTEIN) protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69321
95 % 1 1 48284
90 % 1 1 45931
70 % 1 1 40453
50 % 1 1 34640
40 % 1 1 30552
30 % 1 1 25871

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.