Sequence Similarity Clusters for the Entities in PDB 1FAV

Entity #1 | Chains: A
HIV-1 ENVELOPE PROTEIN CHIMERA protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68130
95 % 1 1 47127
90 % 1 1 44798
70 % 1 1 39459
50 % 1 2 15334
40 % 1 2 13692
30 % 1 2 11723
Entity #2 | Chains: C
PROTEIN (TRANSMEMBRANE GLYCOPROTEIN) protein, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70842
95 % 1 1 49335
90 % 1 1 46894
70 % 1 1 41246
50 % 1 1 35308
40 % 1 1 31145
30 % 1 1 26393

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.