Sequence Similarity Clusters for the Entities in PDB 1FAP

Entity #1 | Chains: A
FK506-BINDING PROTEIN protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 24 40 510
95 % 36 52 548 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 36 52 577
70 % 42 84 193
50 % 54 101 203
40 % 58 106 214
30 % 106 164 174
Entity #2 | Chains: B
FRAP protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 12 2983
95 % 10 13 3382 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 0.8
PDBFlex
90 % 10 13 3436
70 % 10 13 3405
50 % 10 13 3311
40 % 10 13 3211
30 % 10 13 3017

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures