Sequence Similarity Clusters for the Entities in PDB 1F9Q

Entity #1 | Chains: A,B,C,D
PLATELET FACTOR 4 protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 2082
95 % 2 10 1320 Flexibility: Low
Max RMSD: 6.0, Avg RMSD: 3.0
PDBFlex
90 % 2 10 1342
70 % 2 11 1241
50 % 6 21 828
40 % 10 34 633
30 % 14 54 463

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures