Sequence Similarity Clusters for the Entities in PDB 1F9J

Entity #1 | Chains: A,B
TETRAUBIQUITIN protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 196 321 4
95 % 245 396 5 Flexibility: Low
Max RMSD: 5.8, Avg RMSD: 1.1
PDBFlex
90 % 263 423 6
70 % 279 446 8
50 % 286 467 11
40 % 299 491 16
30 % 569 1044 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures