Sequence Similarity Clusters for the Entities in PDB 1F9F

Entity #1 | Chains: A,B,C,D
Regulatory protein E2 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 13011
95 % 1 2 12401 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 1 2 12210
70 % 1 2 11556
50 % 2 12 2088
40 % 2 12 2059
30 % 2 12 1955

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures