Sequence Similarity Clusters for the Entities in PDB 1F9F

Entity #1 | Chains: A,B,C,D
Regulatory protein E2 protein, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 13217
95 % 1 2 12603 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 1 2 12406
70 % 1 2 11721
50 % 2 12 2114
40 % 2 12 2089
30 % 2 12 1985

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures