Sequence Similarity Clusters for the Entities in PDB 1F99

Entity #1 | Chains: A,K,M
R-PHYCOCYANIN protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 27881
95 % 1 1 23154 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 22407
70 % 16 31 372
50 % 16 37 406
40 % 24 46 286
30 % 62 124 125
Entity #2 | Chains: B,L,N
R-PHYCOCYANIN protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 27737
95 % 1 1 23050 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 22304
70 % 16 34 371
50 % 30 54 246
40 % 38 76 198
30 % 63 124 125

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.