Sequence Similarity Clusters for the Entities in PDB 1F99

Entity #1 | Chains: A,K,M
R-PHYCOCYANIN protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28290
95 % 1 1 23514 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 22747
70 % 16 31 377
50 % 16 37 409
40 % 26 48 250
30 % 66 128 115
Entity #2 | Chains: B,L,N
R-PHYCOCYANIN protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28143
95 % 1 1 23408 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 22643
70 % 16 34 376
50 % 32 56 210
40 % 40 78 186
30 % 67 128 115

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.