Sequence Similarity Clusters for the Entities in PDB 1F99

Entity #1 | Chains: A,K,M
R-PHYCOCYANIN protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28634
95 % 1 1 23790 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 23008
70 % 19 36 282
50 % 19 42 283
40 % 29 54 61
30 % 72 143 18
Entity #2 | Chains: B,L,N
R-PHYCOCYANIN protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28488
95 % 1 1 23686 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 22905
70 % 19 39 281
50 % 35 62 38
40 % 43 87 24
30 % 73 143 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.