Sequence Similarity Clusters for the Entities in PDB 1F93

Entity #1 | Chains: A,B,C,D
DIMERIZATION COFACTOR OF HEPATOCYTE NUCLEAR FACTOR 1-ALPHA protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 1509
95 % 3 5 1440
90 % 3 5 1468
70 % 3 5 1490
50 % 7 9 1270
40 % 10 12 1124
30 % 10 12 1109
Entity #2 | Chains: E,F,G,H
HEPATOCYTE NUCLEAR FACTOR 1-ALPHA protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 9515
95 % 5 5 4087
90 % 6 6 3550
70 % 6 6 3496
50 % 6 6 3408
40 % 6 6 3303
30 % 6 6 3081

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.