Sequence Similarity Clusters for the Entities in PDB 1F90

Entity #1 | Chains: L
FAB FRAGMENT OF MONOCLONAL ANTIBODY protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 31107
95 % 33 51 734 Flexibility: Low
Max RMSD: 6.4, Avg RMSD: 1.9
PDBFlex
90 % 34 55 706
70 % 1180 2765 1
50 % 2429 5625 1
40 % 2784 6382 1
30 % 3373 7934 1
Entity #2 | Chains: H
FAB FRAGMENT OF MONOCLONAL ANTIBODY protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 31997
95 % 2 3 27863 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.0
PDBFlex
90 % 6 19 2738
70 % 1175 2728 2
50 % 2430 5625 1
40 % 2785 6382 1
30 % 3374 7934 1
Entity #3 | Chains: E
ANTIGENIC NONAPEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures