Sequence Similarity Clusters for the Entities in PDB 1F90

Entity #1 | Chains: L
FAB FRAGMENT OF MONOCLONAL ANTIBODY protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29251
95 % 34 53 687 Flexibility: Low
Max RMSD: 6.4, Avg RMSD: 1.9
PDBFlex
90 % 34 54 680
70 % 1113 2576 1
50 % 2279 5226 1
40 % 2616 5890 1
30 % 3172 7330 1
Entity #2 | Chains: H
FAB FRAGMENT OF MONOCLONAL ANTIBODY protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 30101
95 % 2 3 26255 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.0
PDBFlex
90 % 6 19 2578
70 % 1102 2532 2
50 % 2280 5226 1
40 % 2617 5890 1
30 % 3173 7330 1
Entity #3 | Chains: E
ANTIGENIC NONAPEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures