Sequence Similarity Clusters for the Entities in PDB 1F90

Entity #1 | Chains: L
FAB FRAGMENT OF MONOCLONAL ANTIBODY protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 26940
95 % 34 51 676 Flexibility: Low
Max RMSD: 6.4, Avg RMSD: 1.9
PDBFlex
90 % 34 52 678
70 % 966 2264 1
50 % 1976 4587 1
40 % 1976 4587 1
30 % 2220 5392 1
Entity #2 | Chains: H
FAB FRAGMENT OF MONOCLONAL ANTIBODY protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39324
95 % 2 3 22441 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.0
PDBFlex
90 % 6 17 2797
70 % 957 2222 2
50 % 1977 4587 1
40 % 1977 4587 1
30 % 2221 5392 1
Entity #3 | Chains: E
ANTIGENIC NONAPEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.