Sequence Similarity Clusters for the Entities in PDB 1F90

Entity #1 | Chains: L
FAB FRAGMENT OF MONOCLONAL ANTIBODY protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 30421
95 % 33 50 764 Flexibility: Low
Max RMSD: 6.4, Avg RMSD: 1.9
PDBFlex
90 % 34 54 718
70 % 1161 2696 1
50 % 2378 5473 1
40 % 2721 6175 1
30 % 3287 7653 1
Entity #2 | Chains: H
FAB FRAGMENT OF MONOCLONAL ANTIBODY protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 31287
95 % 2 3 27269 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.0
PDBFlex
90 % 6 19 2672
70 % 1151 2655 2
50 % 2379 5473 1
40 % 2722 6175 1
30 % 3288 7653 1
Entity #3 | Chains: E
ANTIGENIC NONAPEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures