Sequence Similarity Clusters for the Entities in PDB 1F90

Entity #1 | Chains: L
FAB FRAGMENT OF MONOCLONAL ANTIBODY protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28209
95 % 34 52 676 Flexibility: Low
Max RMSD: 6.4, Avg RMSD: 1.8
PDBFlex
90 % 34 53 683
70 % 1045 2416 1
50 % 2133 4892 1
40 % 2133 4892 1
30 % 2402 5759 1
Entity #2 | Chains: H
FAB FRAGMENT OF MONOCLONAL ANTIBODY protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41081
95 % 2 3 23480 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 6 18 2639
70 % 1031 2366 2
50 % 2134 4892 1
40 % 2134 4892 1
30 % 2403 5759 1
Entity #3 | Chains: E
ANTIGENIC NONAPEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures