Sequence Similarity Clusters for the Entities in PDB 1F8V

Entity #1 | Chains: R
RNA rna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B,C
MATURE CAPSID PROTEIN BETA protein, length: 355 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 24050
95 % 1 1 20304
90 % 1 1 19756
70 % 1 1 18241
50 % 1 1 15915
40 % 1 1 14235
30 % 3 6 2865
Entity #3 | Chains: D,E,F
MATURE CAPSID PROTEIN GAMMA protein, length: 40 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 27844
95 % 1 1 23078
90 % 1 1 22351
70 % 1 1 20468
50 % 1 1 17806
40 % 1 1 15854
30 % 1 1 13593

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.